Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdh17E9PXF0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Pcdh17E9PXF0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdh17E9PXF0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdh17E9PXF0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdh17E9PXF0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdh17E9PXF0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Pcdh17E9PXF0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdh17E9PXF0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdh17E9PXF0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdh17E9PXF0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.23■■□□□ 1.15
Pcdh17E9PXF0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdh17E9PXF0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdh17E9PXF0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdh17E9PXF0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Pcdh17E9PXF0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdh17E9PXF0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdh17E9PXF0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.2■■□□□ 1.14
Pcdh17E9PXF0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Pcdh17E9PXF0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.19■■□□□ 1.14
Pcdh17E9PXF0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.19■■□□□ 1.14
Pcdh17E9PXF0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.18■■□□□ 1.14
Pcdh17E9PXF0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdh17E9PXF0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Pcdh17E9PXF0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh17E9PXF0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh17E9PXF0 Gm30023-201ENSMUST00000197970 889 ntBASIC22.16■■□□□ 1.14
Pcdh17E9PXF0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh17E9PXF0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh17E9PXF0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh17E9PXF0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdh17E9PXF0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Pcdh17E9PXF0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdh17E9PXF0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdh17E9PXF0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.13■■□□□ 1.13
Pcdh17E9PXF0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh17E9PXF0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdh17E9PXF0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.12■■□□□ 1.13
Pcdh17E9PXF0 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.11■■□□□ 1.13
Pcdh17E9PXF0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh17E9PXF0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh17E9PXF0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.11■■□□□ 1.13
Pcdh17E9PXF0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh17E9PXF0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh17E9PXF0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.1■■□□□ 1.13
Pcdh17E9PXF0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.1■■□□□ 1.13
Pcdh17E9PXF0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh17E9PXF0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdh17E9PXF0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdh17E9PXF0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Pcdh17E9PXF0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdh17E9PXF0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pcdh17E9PXF0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.07■■□□□ 1.12
Pcdh17E9PXF0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdh17E9PXF0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdh17E9PXF0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdh17E9PXF0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdh17E9PXF0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdh17E9PXF0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Pcdh17E9PXF0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdh17E9PXF0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.04■■□□□ 1.12
Pcdh17E9PXF0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.04■■□□□ 1.12
Pcdh17E9PXF0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdh17E9PXF0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdh17E9PXF0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Pcdh17E9PXF0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdh17E9PXF0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdh17E9PXF0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdh17E9PXF0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdh17E9PXF0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
Pcdh17E9PXF0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdh17E9PXF0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdh17E9PXF0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Pcdh17E9PXF0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdh17E9PXF0 Particl-201ENSMUST00000205370 1560 ntBASIC22■■□□□ 1.11
Pcdh17E9PXF0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdh17E9PXF0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdh17E9PXF0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdh17E9PXF0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdh17E9PXF0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdh17E9PXF0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.98■■□□□ 1.11
Pcdh17E9PXF0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdh17E9PXF0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdh17E9PXF0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Pcdh17E9PXF0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdh17E9PXF0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Pcdh17E9PXF0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Pcdh17E9PXF0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdh17E9PXF0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Pcdh17E9PXF0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdh17E9PXF0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdh17E9PXF0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdh17E9PXF0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Pcdh17E9PXF0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.92■■□□□ 1.1
Pcdh17E9PXF0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh17E9PXF0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh17E9PXF0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.92■■□□□ 1.1
Pcdh17E9PXF0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh17E9PXF0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh17E9PXF0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms