Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trbv29A0A0G2LB96 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trbv29A0A0G2LB96 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trbv29A0A0G2LB96 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trbv29A0A0G2LB96 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Trbv29A0A0G2LB96 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trbv29A0A0G2LB96 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.83■□□□□ 0.76
Trbv29A0A0G2LB96 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trbv29A0A0G2LB96 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Trbv29A0A0G2LB96 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv29A0A0G2LB96 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv29A0A0G2LB96 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv29A0A0G2LB96 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Trbv29A0A0G2LB96 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv29A0A0G2LB96 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv29A0A0G2LB96 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv29A0A0G2LB96 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trbv29A0A0G2LB96 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv29A0A0G2LB96 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv29A0A0G2LB96 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv29A0A0G2LB96 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv29A0A0G2LB96 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trbv29A0A0G2LB96 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbv29A0A0G2LB96 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbv29A0A0G2LB96 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Trbv29A0A0G2LB96 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv29A0A0G2LB96 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv29A0A0G2LB96 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Trbv29A0A0G2LB96 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv29A0A0G2LB96 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv29A0A0G2LB96 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv29A0A0G2LB96 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv29A0A0G2LB96 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.71■□□□□ 0.75
Trbv29A0A0G2LB96 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv29A0A0G2LB96 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv29A0A0G2LB96 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv29A0A0G2LB96 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trbv29A0A0G2LB96 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv29A0A0G2LB96 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trbv29A0A0G2LB96 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv29A0A0G2LB96 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv29A0A0G2LB96 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv29A0A0G2LB96 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv29A0A0G2LB96 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv29A0A0G2LB96 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv29A0A0G2LB96 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv29A0A0G2LB96 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.67■□□□□ 0.74
Trbv29A0A0G2LB96 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv29A0A0G2LB96 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv29A0A0G2LB96 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv29A0A0G2LB96 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv29A0A0G2LB96 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv29A0A0G2LB96 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv29A0A0G2LB96 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv29A0A0G2LB96 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trbv29A0A0G2LB96 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv29A0A0G2LB96 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv29A0A0G2LB96 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv29A0A0G2LB96 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv29A0A0G2LB96 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv29A0A0G2LB96 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv29A0A0G2LB96 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv29A0A0G2LB96 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv29A0A0G2LB96 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Trbv29A0A0G2LB96 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv29A0A0G2LB96 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv29A0A0G2LB96 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.61■□□□□ 0.73
Trbv29A0A0G2LB96 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv29A0A0G2LB96 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv29A0A0G2LB96 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv29A0A0G2LB96 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trbv29A0A0G2LB96 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv29A0A0G2LB96 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv29A0A0G2LB96 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv29A0A0G2LB96 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv29A0A0G2LB96 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv29A0A0G2LB96 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trbv29A0A0G2LB96 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv29A0A0G2LB96 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv29A0A0G2LB96 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Trbv29A0A0G2LB96 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv29A0A0G2LB96 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.57■□□□□ 0.72
Trbv29A0A0G2LB96 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.57■□□□□ 0.72
Trbv29A0A0G2LB96 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv29A0A0G2LB96 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trbv29A0A0G2LB96 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv29A0A0G2LB96 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv29A0A0G2LB96 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trbv29A0A0G2LB96 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.56■□□□□ 0.72
Trbv29A0A0G2LB96 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv29A0A0G2LB96 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.55■□□□□ 0.72
Trbv29A0A0G2LB96 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv29A0A0G2LB96 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Trbv29A0A0G2LB96 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv29A0A0G2LB96 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv29A0A0G2LB96 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv29A0A0G2LB96 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv29A0A0G2LB96 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.54■□□□□ 0.72
Trbv29A0A0G2LB96 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.54■□□□□ 0.72
Trbv29A0A0G2LB96 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms