Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ighv1-47A0A0A6YY41 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.68■□□□□ 0.74
Ighv1-47A0A0A6YY41 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.68■□□□□ 0.74
Ighv1-47A0A0A6YY41 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.68■□□□□ 0.74
Ighv1-47A0A0A6YY41 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ighv1-47A0A0A6YY41 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-47A0A0A6YY41 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-47A0A0A6YY41 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-47A0A0A6YY41 Gm24970-201ENSMUST00000175582 82 ntBASIC19.67■□□□□ 0.74
Ighv1-47A0A0A6YY41 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-47A0A0A6YY41 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ighv1-47A0A0A6YY41 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-47A0A0A6YY41 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ighv1-47A0A0A6YY41 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Ighv1-47A0A0A6YY41 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ighv1-47A0A0A6YY41 Gm45855-201ENSMUST00000212546 880 ntBASIC19.66■□□□□ 0.74
Ighv1-47A0A0A6YY41 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ighv1-47A0A0A6YY41 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ighv1-47A0A0A6YY41 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Ighv1-47A0A0A6YY41 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ighv1-47A0A0A6YY41 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ighv1-47A0A0A6YY41 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ighv1-47A0A0A6YY41 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.64■□□□□ 0.73
Ighv1-47A0A0A6YY41 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ighv1-47A0A0A6YY41 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Ighv1-47A0A0A6YY41 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ighv1-47A0A0A6YY41 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ighv1-47A0A0A6YY41 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ighv1-47A0A0A6YY41 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.62■□□□□ 0.73
Ighv1-47A0A0A6YY41 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.62■□□□□ 0.73
Ighv1-47A0A0A6YY41 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ighv1-47A0A0A6YY41 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ighv1-47A0A0A6YY41 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ighv1-47A0A0A6YY41 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.61■□□□□ 0.73
Ighv1-47A0A0A6YY41 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv1-47A0A0A6YY41 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv1-47A0A0A6YY41 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-47A0A0A6YY41 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-47A0A0A6YY41 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-47A0A0A6YY41 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-47A0A0A6YY41 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-47A0A0A6YY41 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-47A0A0A6YY41 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv1-47A0A0A6YY41 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv1-47A0A0A6YY41 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ighv1-47A0A0A6YY41 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-47A0A0A6YY41 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-47A0A0A6YY41 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv1-47A0A0A6YY41 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv1-47A0A0A6YY41 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv1-47A0A0A6YY41 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.55■□□□□ 0.72
Ighv1-47A0A0A6YY41 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv1-47A0A0A6YY41 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv1-47A0A0A6YY41 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv1-47A0A0A6YY41 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv1-47A0A0A6YY41 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ighv1-47A0A0A6YY41 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ighv1-47A0A0A6YY41 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv1-47A0A0A6YY41 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv1-47A0A0A6YY41 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv1-47A0A0A6YY41 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv1-47A0A0A6YY41 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv1-47A0A0A6YY41 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.5■□□□□ 0.71
Ighv1-47A0A0A6YY41 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Ighv1-47A0A0A6YY41 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-47A0A0A6YY41 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-47A0A0A6YY41 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv1-47A0A0A6YY41 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.48■□□□□ 0.71
Ighv1-47A0A0A6YY41 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv1-47A0A0A6YY41 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv1-47A0A0A6YY41 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv1-47A0A0A6YY41 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.47■□□□□ 0.71
Ighv1-47A0A0A6YY41 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ighv1-47A0A0A6YY41 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv1-47A0A0A6YY41 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv1-47A0A0A6YY41 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv1-47A0A0A6YY41 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv1-47A0A0A6YY41 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv1-47A0A0A6YY41 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Ighv1-47A0A0A6YY41 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ighv1-47A0A0A6YY41 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ighv1-47A0A0A6YY41 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.45■□□□□ 0.7
Ighv1-47A0A0A6YY41 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ighv1-47A0A0A6YY41 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ighv1-47A0A0A6YY41 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ighv1-47A0A0A6YY41 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ighv1-47A0A0A6YY41 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ighv1-47A0A0A6YY41 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ighv1-47A0A0A6YY41 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ighv1-47A0A0A6YY41 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ighv1-47A0A0A6YY41 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ighv1-47A0A0A6YY41 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ighv1-47A0A0A6YY41 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ighv1-47A0A0A6YY41 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ighv1-47A0A0A6YY41 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ighv1-47A0A0A6YY41 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ighv1-47A0A0A6YY41 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.42■□□□□ 0.7
Ighv1-47A0A0A6YY41 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ighv1-47A0A0A6YY41 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ighv1-47A0A0A6YY41 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms