Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trbc1A0A0A6YWV4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trbc1A0A0A6YWV4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trbc1A0A0A6YWV4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trbc1A0A0A6YWV4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trbc1A0A0A6YWV4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trbc1A0A0A6YWV4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trbc1A0A0A6YWV4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Trbc1A0A0A6YWV4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trbc1A0A0A6YWV4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Trbc1A0A0A6YWV4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trbc1A0A0A6YWV4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trbc1A0A0A6YWV4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Trbc1A0A0A6YWV4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trbc1A0A0A6YWV4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trbc1A0A0A6YWV4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trbc1A0A0A6YWV4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trbc1A0A0A6YWV4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.9■■□□□ 1.1
Trbc1A0A0A6YWV4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trbc1A0A0A6YWV4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trbc1A0A0A6YWV4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Trbc1A0A0A6YWV4 Gm6821-201ENSMUST00000107540 542 ntBASIC21.88■■□□□ 1.09
Trbc1A0A0A6YWV4 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.88■■□□□ 1.09
Trbc1A0A0A6YWV4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trbc1A0A0A6YWV4 Nkain2-201ENSMUST00000092602 558 ntBASIC21.87■■□□□ 1.09
Trbc1A0A0A6YWV4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trbc1A0A0A6YWV4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trbc1A0A0A6YWV4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trbc1A0A0A6YWV4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Trbc1A0A0A6YWV4 Gm8503-201ENSMUST00000118131 455 ntBASIC21.86■■□□□ 1.09
Trbc1A0A0A6YWV4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.86■■□□□ 1.09
Trbc1A0A0A6YWV4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Trbc1A0A0A6YWV4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trbc1A0A0A6YWV4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trbc1A0A0A6YWV4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trbc1A0A0A6YWV4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trbc1A0A0A6YWV4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Trbc1A0A0A6YWV4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Trbc1A0A0A6YWV4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
Trbc1A0A0A6YWV4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Trbc1A0A0A6YWV4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Trbc1A0A0A6YWV4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trbc1A0A0A6YWV4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trbc1A0A0A6YWV4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trbc1A0A0A6YWV4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trbc1A0A0A6YWV4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trbc1A0A0A6YWV4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trbc1A0A0A6YWV4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trbc1A0A0A6YWV4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trbc1A0A0A6YWV4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.82■■□□□ 1.08
Trbc1A0A0A6YWV4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trbc1A0A0A6YWV4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trbc1A0A0A6YWV4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trbc1A0A0A6YWV4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.8■■□□□ 1.08
Trbc1A0A0A6YWV4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trbc1A0A0A6YWV4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.79■■□□□ 1.08
Trbc1A0A0A6YWV4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trbc1A0A0A6YWV4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.78■■□□□ 1.08
Trbc1A0A0A6YWV4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trbc1A0A0A6YWV4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trbc1A0A0A6YWV4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trbc1A0A0A6YWV4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trbc1A0A0A6YWV4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trbc1A0A0A6YWV4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trbc1A0A0A6YWV4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Trbc1A0A0A6YWV4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trbc1A0A0A6YWV4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.73■■□□□ 1.07
Trbc1A0A0A6YWV4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trbc1A0A0A6YWV4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trbc1A0A0A6YWV4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trbc1A0A0A6YWV4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
Trbc1A0A0A6YWV4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.73■■□□□ 1.07
Trbc1A0A0A6YWV4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trbc1A0A0A6YWV4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trbc1A0A0A6YWV4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trbc1A0A0A6YWV4 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.72■■□□□ 1.07
Trbc1A0A0A6YWV4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Trbc1A0A0A6YWV4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trbc1A0A0A6YWV4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trbc1A0A0A6YWV4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trbc1A0A0A6YWV4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.71■■□□□ 1.07
Trbc1A0A0A6YWV4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.7■■□□□ 1.06
Trbc1A0A0A6YWV4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trbc1A0A0A6YWV4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Trbc1A0A0A6YWV4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.68■■□□□ 1.06
Trbc1A0A0A6YWV4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trbc1A0A0A6YWV4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trbc1A0A0A6YWV4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trbc1A0A0A6YWV4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trbc1A0A0A6YWV4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trbc1A0A0A6YWV4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.65■■□□□ 1.06
Trbc1A0A0A6YWV4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trbc1A0A0A6YWV4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trbc1A0A0A6YWV4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trbc1A0A0A6YWV4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trbc1A0A0A6YWV4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trbc1A0A0A6YWV4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trbc1A0A0A6YWV4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trbc1A0A0A6YWV4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trbc1A0A0A6YWV4 Gm30023-201ENSMUST00000197970 889 ntBASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms