Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv3-3A0A0A6YWL2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv3-3A0A0A6YWL2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv3-3A0A0A6YWL2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv3-3A0A0A6YWL2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.54■□□□□ 0.4
Ighv3-3A0A0A6YWL2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv3-3A0A0A6YWL2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv3-3A0A0A6YWL2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv3-3A0A0A6YWL2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv3-3A0A0A6YWL2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Ighv3-3A0A0A6YWL2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv3-3A0A0A6YWL2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Ighv3-3A0A0A6YWL2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.46■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv3-3A0A0A6YWL2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv3-3A0A0A6YWL2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv3-3A0A0A6YWL2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.45■□□□□ 0.38
Ighv3-3A0A0A6YWL2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv3-3A0A0A6YWL2 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.44■□□□□ 0.38
Ighv3-3A0A0A6YWL2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv3-3A0A0A6YWL2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.43■□□□□ 0.38
Ighv3-3A0A0A6YWL2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv3-3A0A0A6YWL2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ighv3-3A0A0A6YWL2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.42■□□□□ 0.38
Ighv3-3A0A0A6YWL2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.42■□□□□ 0.38
Ighv3-3A0A0A6YWL2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ighv3-3A0A0A6YWL2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.41■□□□□ 0.38
Ighv3-3A0A0A6YWL2 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.41■□□□□ 0.38
Ighv3-3A0A0A6YWL2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.41■□□□□ 0.38
Ighv3-3A0A0A6YWL2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv3-3A0A0A6YWL2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ighv3-3A0A0A6YWL2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv3-3A0A0A6YWL2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ighv3-3A0A0A6YWL2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv3-3A0A0A6YWL2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv3-3A0A0A6YWL2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Ighv3-3A0A0A6YWL2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv3-3A0A0A6YWL2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv3-3A0A0A6YWL2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv3-3A0A0A6YWL2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.38■□□□□ 0.37
Ighv3-3A0A0A6YWL2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ighv3-3A0A0A6YWL2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv3-3A0A0A6YWL2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv3-3A0A0A6YWL2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.37■□□□□ 0.37
Ighv3-3A0A0A6YWL2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv3-3A0A0A6YWL2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv3-3A0A0A6YWL2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv3-3A0A0A6YWL2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv3-3A0A0A6YWL2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv3-3A0A0A6YWL2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ighv3-3A0A0A6YWL2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv3-3A0A0A6YWL2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv3-3A0A0A6YWL2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv3-3A0A0A6YWL2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv3-3A0A0A6YWL2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv3-3A0A0A6YWL2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.32■□□□□ 0.36
Ighv3-3A0A0A6YWL2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv3-3A0A0A6YWL2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.31■□□□□ 0.36
Ighv3-3A0A0A6YWL2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Gm24970-201ENSMUST00000175582 82 ntBASIC17.3■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.3■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.3■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv3-3A0A0A6YWL2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv3-3A0A0A6YWL2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.29■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.29■□□□□ 0.36
Ighv3-3A0A0A6YWL2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv3-3A0A0A6YWL2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv3-3A0A0A6YWL2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms