Protein–RNA interactions for Protein: A0A087WSK7

Gm28778, Predicted gene 28778 (Fragment), mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28778A0A087WSK7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.54■□□□□ 0.72
Gm28778A0A087WSK7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm28778A0A087WSK7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.53■□□□□ 0.72
Gm28778A0A087WSK7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm28778A0A087WSK7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Gm28778A0A087WSK7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Gm28778A0A087WSK7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Gm28778A0A087WSK7 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.52■□□□□ 0.72
Gm28778A0A087WSK7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Gm28778A0A087WSK7 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.52■□□□□ 0.72
Gm28778A0A087WSK7 Nkain2-201ENSMUST00000092602 558 ntBASIC19.52■□□□□ 0.72
Gm28778A0A087WSK7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm28778A0A087WSK7 Gm30023-201ENSMUST00000197970 889 ntBASIC19.51■□□□□ 0.71
Gm28778A0A087WSK7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Gm28778A0A087WSK7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm28778A0A087WSK7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gm28778A0A087WSK7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm28778A0A087WSK7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.5■□□□□ 0.71
Gm28778A0A087WSK7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm28778A0A087WSK7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.5■□□□□ 0.71
Gm28778A0A087WSK7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28778A0A087WSK7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28778A0A087WSK7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28778A0A087WSK7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28778A0A087WSK7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
Gm28778A0A087WSK7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm28778A0A087WSK7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm28778A0A087WSK7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm28778A0A087WSK7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28778A0A087WSK7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28778A0A087WSK7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28778A0A087WSK7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28778A0A087WSK7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm28778A0A087WSK7 Gm6821-201ENSMUST00000107540 542 ntBASIC19.45■□□□□ 0.7
Gm28778A0A087WSK7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.45■□□□□ 0.7
Gm28778A0A087WSK7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gm28778A0A087WSK7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm28778A0A087WSK7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm28778A0A087WSK7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Gm28778A0A087WSK7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28778A0A087WSK7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28778A0A087WSK7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28778A0A087WSK7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28778A0A087WSK7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Gm28778A0A087WSK7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28778A0A087WSK7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28778A0A087WSK7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28778A0A087WSK7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gm28778A0A087WSK7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm28778A0A087WSK7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28778A0A087WSK7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28778A0A087WSK7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm28778A0A087WSK7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Gm28778A0A087WSK7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.39■□□□□ 0.69
Gm28778A0A087WSK7 Gm8503-201ENSMUST00000118131 455 ntBASIC19.39■□□□□ 0.69
Gm28778A0A087WSK7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm28778A0A087WSK7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28778A0A087WSK7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28778A0A087WSK7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28778A0A087WSK7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.38■□□□□ 0.69
Gm28778A0A087WSK7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm28778A0A087WSK7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Gm28778A0A087WSK7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm28778A0A087WSK7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gm28778A0A087WSK7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.36■□□□□ 0.69
Gm28778A0A087WSK7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.36■□□□□ 0.69
Gm28778A0A087WSK7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.35■□□□□ 0.69
Gm28778A0A087WSK7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Gm28778A0A087WSK7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm28778A0A087WSK7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.34■□□□□ 0.69
Gm28778A0A087WSK7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.34■□□□□ 0.69
Gm28778A0A087WSK7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.33■□□□□ 0.68
Gm28778A0A087WSK7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.33■□□□□ 0.68
Gm28778A0A087WSK7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.33■□□□□ 0.68
Gm28778A0A087WSK7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.33■□□□□ 0.68
Gm28778A0A087WSK7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm28778A0A087WSK7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28778A0A087WSK7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28778A0A087WSK7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.31■□□□□ 0.68
Gm28778A0A087WSK7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28778A0A087WSK7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Gm28778A0A087WSK7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm28778A0A087WSK7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.3■□□□□ 0.68
Gm28778A0A087WSK7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28778A0A087WSK7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28778A0A087WSK7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28778A0A087WSK7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28778A0A087WSK7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm28778A0A087WSK7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28778A0A087WSK7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28778A0A087WSK7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28778A0A087WSK7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.26■□□□□ 0.67
Gm28778A0A087WSK7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28778A0A087WSK7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28778A0A087WSK7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28778A0A087WSK7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.25■□□□□ 0.67
Gm28778A0A087WSK7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28778A0A087WSK7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28778A0A087WSK7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Gm28778A0A087WSK7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms