Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.34■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav13-4-dv7A0A075B6C2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.3■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC16.29■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Gm16148-201ENSMUST00000119653 893 ntBASIC16.29■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Gm24804-201ENSMUST00000174982 85 ntBASIC16.29■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav13-4-dv7A0A075B6C2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.26■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav13-4-dv7A0A075B6C2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.16■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13-4-dv7A0A075B6C2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13-4-dv7A0A075B6C2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav13-4-dv7A0A075B6C2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav13-4-dv7A0A075B6C2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav13-4-dv7A0A075B6C2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13-4-dv7A0A075B6C2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13-4-dv7A0A075B6C2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13-4-dv7A0A075B6C2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13-4-dv7A0A075B6C2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav13-4-dv7A0A075B6C2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13-4-dv7A0A075B6C2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13-4-dv7A0A075B6C2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13-4-dv7A0A075B6C2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms