Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav4-4-dv10A0A075B651 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trav4-4-dv10A0A075B651 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav4-4-dv10A0A075B651 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav4-4-dv10A0A075B651 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trav4-4-dv10A0A075B651 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav4-4-dv10A0A075B651 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav4-4-dv10A0A075B651 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav4-4-dv10A0A075B651 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trav4-4-dv10A0A075B651 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav4-4-dv10A0A075B651 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav4-4-dv10A0A075B651 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.56■□□□□ 0.56
Trav4-4-dv10A0A075B651 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav4-4-dv10A0A075B651 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav4-4-dv10A0A075B651 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav4-4-dv10A0A075B651 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Trav4-4-dv10A0A075B651 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav4-4-dv10A0A075B651 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav4-4-dv10A0A075B651 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav4-4-dv10A0A075B651 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav4-4-dv10A0A075B651 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav4-4-dv10A0A075B651 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav4-4-dv10A0A075B651 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav4-4-dv10A0A075B651 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav4-4-dv10A0A075B651 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav4-4-dv10A0A075B651 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.53■□□□□ 0.56
Trav4-4-dv10A0A075B651 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav4-4-dv10A0A075B651 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav4-4-dv10A0A075B651 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav4-4-dv10A0A075B651 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav4-4-dv10A0A075B651 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav4-4-dv10A0A075B651 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.52■□□□□ 0.55
Trav4-4-dv10A0A075B651 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav4-4-dv10A0A075B651 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav4-4-dv10A0A075B651 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav4-4-dv10A0A075B651 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav4-4-dv10A0A075B651 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav4-4-dv10A0A075B651 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav4-4-dv10A0A075B651 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav4-4-dv10A0A075B651 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav4-4-dv10A0A075B651 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav4-4-dv10A0A075B651 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav4-4-dv10A0A075B651 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav4-4-dv10A0A075B651 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trav4-4-dv10A0A075B651 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav4-4-dv10A0A075B651 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav4-4-dv10A0A075B651 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav4-4-dv10A0A075B651 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav4-4-dv10A0A075B651 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav4-4-dv10A0A075B651 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trav4-4-dv10A0A075B651 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trav4-4-dv10A0A075B651 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav4-4-dv10A0A075B651 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav4-4-dv10A0A075B651 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav4-4-dv10A0A075B651 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trav4-4-dv10A0A075B651 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Trav4-4-dv10A0A075B651 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav4-4-dv10A0A075B651 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav4-4-dv10A0A075B651 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav4-4-dv10A0A075B651 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.45■□□□□ 0.54
Trav4-4-dv10A0A075B651 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav4-4-dv10A0A075B651 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav4-4-dv10A0A075B651 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav4-4-dv10A0A075B651 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav4-4-dv10A0A075B651 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav4-4-dv10A0A075B651 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav4-4-dv10A0A075B651 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav4-4-dv10A0A075B651 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav4-4-dv10A0A075B651 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trav4-4-dv10A0A075B651 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav4-4-dv10A0A075B651 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trav4-4-dv10A0A075B651 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav4-4-dv10A0A075B651 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav4-4-dv10A0A075B651 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Trav4-4-dv10A0A075B651 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav4-4-dv10A0A075B651 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav4-4-dv10A0A075B651 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav4-4-dv10A0A075B651 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav4-4-dv10A0A075B651 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trav4-4-dv10A0A075B651 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav4-4-dv10A0A075B651 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav4-4-dv10A0A075B651 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.37■□□□□ 0.53
Trav4-4-dv10A0A075B651 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav4-4-dv10A0A075B651 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav4-4-dv10A0A075B651 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trav4-4-dv10A0A075B651 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav4-4-dv10A0A075B651 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav4-4-dv10A0A075B651 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trav4-4-dv10A0A075B651 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav4-4-dv10A0A075B651 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav4-4-dv10A0A075B651 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav4-4-dv10A0A075B651 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav4-4-dv10A0A075B651 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav4-4-dv10A0A075B651 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav4-4-dv10A0A075B651 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Trav4-4-dv10A0A075B651 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav4-4-dv10A0A075B651 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav4-4-dv10A0A075B651 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav4-4-dv10A0A075B651 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav4-4-dv10A0A075B651 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms