Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trav15-2-dv6-2A0A075B650 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Trav15-2-dv6-2A0A075B650 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav15-2-dv6-2A0A075B650 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav15-2-dv6-2A0A075B650 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav15-2-dv6-2A0A075B650 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav15-2-dv6-2A0A075B650 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav15-2-dv6-2A0A075B650 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav15-2-dv6-2A0A075B650 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.46■□□□□ 0.71
Trav15-2-dv6-2A0A075B650 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav15-2-dv6-2A0A075B650 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav15-2-dv6-2A0A075B650 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.45■□□□□ 0.7
Trav15-2-dv6-2A0A075B650 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav15-2-dv6-2A0A075B650 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav15-2-dv6-2A0A075B650 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trav15-2-dv6-2A0A075B650 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trav15-2-dv6-2A0A075B650 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav15-2-dv6-2A0A075B650 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav15-2-dv6-2A0A075B650 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav15-2-dv6-2A0A075B650 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav15-2-dv6-2A0A075B650 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav15-2-dv6-2A0A075B650 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav15-2-dv6-2A0A075B650 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav15-2-dv6-2A0A075B650 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav15-2-dv6-2A0A075B650 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav15-2-dv6-2A0A075B650 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav15-2-dv6-2A0A075B650 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Gm16148-201ENSMUST00000119653 893 ntBASIC19.37■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Gm24804-201ENSMUST00000174982 85 ntBASIC19.36■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav15-2-dv6-2A0A075B650 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.3■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav15-2-dv6-2A0A075B650 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.26■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.25■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.25■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.21■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav15-2-dv6-2A0A075B650 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms