Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13d-1A0A075B606 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13d-1A0A075B606 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13d-1A0A075B606 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13d-1A0A075B606 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13d-1A0A075B606 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav13d-1A0A075B606 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13d-1A0A075B606 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav13d-1A0A075B606 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13d-1A0A075B606 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13d-1A0A075B606 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13d-1A0A075B606 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.36■□□□□ 0.37
Trav13d-1A0A075B606 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav13d-1A0A075B606 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Trav13d-1A0A075B606 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
Trav13d-1A0A075B606 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav13d-1A0A075B606 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav13d-1A0A075B606 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trav13d-1A0A075B606 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trav13d-1A0A075B606 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.33■□□□□ 0.36
Trav13d-1A0A075B606 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav13d-1A0A075B606 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav13d-1A0A075B606 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav13d-1A0A075B606 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav13d-1A0A075B606 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Trav13d-1A0A075B606 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.31■□□□□ 0.36
Trav13d-1A0A075B606 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav13d-1A0A075B606 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.3■□□□□ 0.36
Trav13d-1A0A075B606 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav13d-1A0A075B606 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13d-1A0A075B606 Gm7432-201ENSMUST00000210343 879 ntBASIC17.29■□□□□ 0.36
Trav13d-1A0A075B606 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13d-1A0A075B606 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13d-1A0A075B606 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.29■□□□□ 0.36
Trav13d-1A0A075B606 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav13d-1A0A075B606 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trav13d-1A0A075B606 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.27■□□□□ 0.36
Trav13d-1A0A075B606 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-1A0A075B606 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
Trav13d-1A0A075B606 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-1A0A075B606 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-1A0A075B606 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav13d-1A0A075B606 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav13d-1A0A075B606 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13d-1A0A075B606 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13d-1A0A075B606 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav13d-1A0A075B606 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13d-1A0A075B606 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13d-1A0A075B606 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav13d-1A0A075B606 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13d-1A0A075B606 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.24■□□□□ 0.35
Trav13d-1A0A075B606 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13d-1A0A075B606 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav13d-1A0A075B606 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13d-1A0A075B606 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13d-1A0A075B606 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13d-1A0A075B606 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav13d-1A0A075B606 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13d-1A0A075B606 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13d-1A0A075B606 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13d-1A0A075B606 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav13d-1A0A075B606 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13d-1A0A075B606 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav13d-1A0A075B606 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13d-1A0A075B606 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.21■□□□□ 0.35
Trav13d-1A0A075B606 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav13d-1A0A075B606 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav13d-1A0A075B606 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.2■□□□□ 0.34
Trav13d-1A0A075B606 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav13d-1A0A075B606 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trav13d-1A0A075B606 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav13d-1A0A075B606 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav13d-1A0A075B606 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13d-1A0A075B606 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13d-1A0A075B606 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav13d-1A0A075B606 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13d-1A0A075B606 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav13d-1A0A075B606 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav13d-1A0A075B606 Gm11599-201ENSMUST00000118720 878 ntBASIC17.18■□□□□ 0.34
Trav13d-1A0A075B606 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.18■□□□□ 0.34
Trav13d-1A0A075B606 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13d-1A0A075B606 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav13d-1A0A075B606 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.17■□□□□ 0.34
Trav13d-1A0A075B606 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13d-1A0A075B606 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav13d-1A0A075B606 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav13d-1A0A075B606 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13d-1A0A075B606 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav13d-1A0A075B606 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-1A0A075B606 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-1A0A075B606 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-1A0A075B606 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-1A0A075B606 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13d-1A0A075B606 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav13d-1A0A075B606 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13d-1A0A075B606 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13d-1A0A075B606 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13d-1A0A075B606 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13d-1A0A075B606 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.15■□□□□ 0.34
Trav13d-1A0A075B606 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms