Protein–RNA interactions for Protein: A0A075B5Y3

Ighv1-80, Immunoglobulin heavy variable 1-80 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-80A0A075B5Y3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-80A0A075B5Y3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-80A0A075B5Y3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-80A0A075B5Y3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ighv1-80A0A075B5Y3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-80A0A075B5Y3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-80A0A075B5Y3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.15■□□□□ 0.5
Ighv1-80A0A075B5Y3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-80A0A075B5Y3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-80A0A075B5Y3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-80A0A075B5Y3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-80A0A075B5Y3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-80A0A075B5Y3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-80A0A075B5Y3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-80A0A075B5Y3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.13■□□□□ 0.49
Ighv1-80A0A075B5Y3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-80A0A075B5Y3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.11■□□□□ 0.49
Ighv1-80A0A075B5Y3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ighv1-80A0A075B5Y3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-80A0A075B5Y3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-80A0A075B5Y3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.1■□□□□ 0.49
Ighv1-80A0A075B5Y3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Ighv1-80A0A075B5Y3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-80A0A075B5Y3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.09■□□□□ 0.49
Ighv1-80A0A075B5Y3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-80A0A075B5Y3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ighv1-80A0A075B5Y3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-80A0A075B5Y3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-80A0A075B5Y3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-80A0A075B5Y3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-80A0A075B5Y3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-80A0A075B5Y3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ighv1-80A0A075B5Y3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-80A0A075B5Y3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-80A0A075B5Y3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-80A0A075B5Y3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-80A0A075B5Y3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ighv1-80A0A075B5Y3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-80A0A075B5Y3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ighv1-80A0A075B5Y3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-80A0A075B5Y3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-80A0A075B5Y3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Ighv1-80A0A075B5Y3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-80A0A075B5Y3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ighv1-80A0A075B5Y3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-80A0A075B5Y3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-80A0A075B5Y3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-80A0A075B5Y3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-80A0A075B5Y3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-80A0A075B5Y3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-80A0A075B5Y3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-80A0A075B5Y3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-80A0A075B5Y3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-80A0A075B5Y3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-80A0A075B5Y3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.01■□□□□ 0.47
Ighv1-80A0A075B5Y3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-80A0A075B5Y3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ighv1-80A0A075B5Y3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-80A0A075B5Y3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-80A0A075B5Y3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Ighv1-80A0A075B5Y3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-80A0A075B5Y3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-80A0A075B5Y3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Ighv1-80A0A075B5Y3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-80A0A075B5Y3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ighv1-80A0A075B5Y3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-80A0A075B5Y3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-80A0A075B5Y3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-80A0A075B5Y3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-80A0A075B5Y3 Gm30023-201ENSMUST00000197970 889 ntBASIC17.97■□□□□ 0.47
Ighv1-80A0A075B5Y3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-80A0A075B5Y3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-80A0A075B5Y3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Ighv1-80A0A075B5Y3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ighv1-80A0A075B5Y3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-80A0A075B5Y3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-80A0A075B5Y3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ighv1-80A0A075B5Y3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-80A0A075B5Y3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.96■□□□□ 0.47
Ighv1-80A0A075B5Y3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-80A0A075B5Y3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-80A0A075B5Y3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-80A0A075B5Y3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ighv1-80A0A075B5Y3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-80A0A075B5Y3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-80A0A075B5Y3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-80A0A075B5Y3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-80A0A075B5Y3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-80A0A075B5Y3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.94■□□□□ 0.46
Ighv1-80A0A075B5Y3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-80A0A075B5Y3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ighv1-80A0A075B5Y3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-80A0A075B5Y3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-80A0A075B5Y3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ighv1-80A0A075B5Y3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-80A0A075B5Y3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ighv1-80A0A075B5Y3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-80A0A075B5Y3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.93■□□□□ 0.46
Ighv1-80A0A075B5Y3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.93■□□□□ 0.46
Ighv1-80A0A075B5Y3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms