Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ST13P6-201ENST00000522430 1102 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 LYZ-202ENST00000548839 558 ntTSL 2 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 HNRNPA1P71-201ENST00000559135 950 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 NDUFA3P4-201ENST00000560814 250 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 IGLJCOR18-201ENST00000584002 424 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 AL118556.2-201ENST00000614375 824 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 AC078909.2-201ENST00000620584 398 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 TSHZ2-205ENST00000626626 670 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 EEF1A1P16-201ENST00000325349 1414 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 AC005614.1-201ENST00000598952 3653 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 SLC2A3P4-201ENST00000521259 1471 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 AC090771.1-201ENST00000585803 1618 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 CTAGE11P-201ENST00000451540 2353 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AC073342.2-201ENST00000595842 1800 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AC011379.1-201ENST00000508713 3025 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AL590762.1-201ENST00000391782 432 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 SETP22-201ENST00000412243 957 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AL662791.3-201ENST00000413771 776 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 MICG-208ENST00000416822 132 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AL390728.3-201ENST00000452704 270 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 RN7SL325P-201ENST00000460434 283 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 RN7SL392P-201ENST00000473024 299 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AC131233.1-201ENST00000479200 955 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AF305872.1-201ENST00000485217 471 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 RPL10P7-201ENST00000495649 625 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 OR52A4P-203ENST00000498233 1014 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 NACAP6-201ENST00000509572 622 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 TEK-204ENST00000519097 3836 ntTSL 2 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 IGHVII-51-2-201ENST00000519778 259 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 DCN-215ENST00000550099 719 ntTSL 2 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AC061975.5-201ENST00000584928 1441 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 PRR13P5-201ENST00000596581 442 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AC137695.2-201ENST00000603123 754 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AC100814.1-201ENST00000606963 623 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 TEX41-279ENST00000629149 609 ntTSL 5 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 MFSD8-256ENST00000641949 1640 ntBASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CHMP4CQ96CF2 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 RMST-210ENST00000640149 2844 ntTSL 5 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 RNA5SP302-201ENST00000364896 100 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 SNORA70.5-201ENST00000365519 135 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 MIR199B-201ENST00000384849 110 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 AL139100.1-201ENST00000408001 498 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 AL773545.3-201ENST00000414297 706 ntBASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CHMP4CQ96CF2 GAPDHP69-201ENST00000425504 1008 ntBASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms