Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.64□□□□□ -1.35
NKX6-1P78426 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.64□□□□□ -1.35
NKX6-1P78426 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.64□□□□□ -1.35
NKX6-1P78426 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NKX6-1P78426 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.64□□□□□ -1.35
NKX6-1P78426 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.64□□□□□ -1.35
NKX6-1P78426 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.64□□□□□ -1.35
NKX6-1P78426 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
NKX6-1P78426 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.64□□□□□ -1.35
NKX6-1P78426 RN7SL131P-201ENST00000579043 256 ntBASIC6.64□□□□□ -1.35
NKX6-1P78426 MIR4760-201ENST00000585040 80 ntBASIC6.64□□□□□ -1.35
NKX6-1P78426 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.64□□□□□ -1.35
NKX6-1P78426 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6.64□□□□□ -1.35
NKX6-1P78426 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.64□□□□□ -1.35
NKX6-1P78426 RPS11-202ENST00000594493 575 ntTSL 3 BASIC6.64□□□□□ -1.35
NKX6-1P78426 AC133794.1-201ENST00000602731 914 ntBASIC6.64□□□□□ -1.35
NKX6-1P78426 AL591222.2-201ENST00000604443 754 ntBASIC6.64□□□□□ -1.35
NKX6-1P78426 MIR8082-201ENST00000612488 81 ntBASIC6.64□□□□□ -1.35
NKX6-1P78426 CR589904.2-201ENST00000612533 440 ntBASIC6.64□□□□□ -1.35
NKX6-1P78426 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NKX6-1P78426 FKBP1AP4-201ENST00000631775 336 ntBASIC6.64□□□□□ -1.35
NKX6-1P78426 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.64□□□□□ -1.35
NKX6-1P78426 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NKX6-1P78426 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NKX6-1P78426 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.64□□□□□ -1.35
NKX6-1P78426 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NKX6-1P78426 AC005261.6-201ENST00000623072 1387 ntBASIC6.64□□□□□ -1.35
NKX6-1P78426 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NKX6-1P78426 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NKX6-1P78426 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NKX6-1P78426 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NKX6-1P78426 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
NKX6-1P78426 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
NKX6-1P78426 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
NKX6-1P78426 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.64□□□□□ -1.35
NKX6-1P78426 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.64□□□□□ -1.35
NKX6-1P78426 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NKX6-1P78426 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NKX6-1P78426 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC6.64□□□□□ -1.35
NKX6-1P78426 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NKX6-1P78426 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NKX6-1P78426 MFSD8-227ENST00000641393 4069 ntBASIC6.64□□□□□ -1.35
NKX6-1P78426 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC6.64□□□□□ -1.35
NKX6-1P78426 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NKX6-1P78426 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
NKX6-1P78426 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NKX6-1P78426 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
NKX6-1P78426 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NKX6-1P78426 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.63□□□□□ -1.35
NKX6-1P78426 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
NKX6-1P78426 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
NKX6-1P78426 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
NKX6-1P78426 EEF1A1P4-201ENST00000359165 1405 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 RNA5SP448-201ENST00000363151 111 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NKX6-1P78426 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NKX6-1P78426 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
NKX6-1P78426 SRI-202ENST00000394641 653 ntTSL 2 BASIC6.63□□□□□ -1.35
NKX6-1P78426 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NKX6-1P78426 AC009500.1-201ENST00000420684 583 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC6.63□□□□□ -1.35
NKX6-1P78426 SNX18P14-201ENST00000429308 574 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 AL590682.1-201ENST00000437248 344 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 AC140479.1-201ENST00000440423 337 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 XKRY2-201ENST00000442362 1093 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.63□□□□□ -1.35
NKX6-1P78426 AL137074.1-201ENST00000442640 465 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.63□□□□□ -1.35
NKX6-1P78426 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC6.63□□□□□ -1.35
NKX6-1P78426 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC6.63□□□□□ -1.35
NKX6-1P78426 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NKX6-1P78426 RN7SL635P-201ENST00000492123 296 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 RN7SL612P-201ENST00000497704 295 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 AC122714.1-201ENST00000502510 459 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 AL445187.1-201ENST00000502685 260 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 AC079768.1-201ENST00000503181 711 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
NKX6-1P78426 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.63□□□□□ -1.35
NKX6-1P78426 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC6.63□□□□□ -1.35
NKX6-1P78426 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
NKX6-1P78426 IGKV3D-31-201ENST00000519131 281 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.63□□□□□ -1.35
NKX6-1P78426 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
NKX6-1P78426 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC6.63□□□□□ -1.35
NKX6-1P78426 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.63□□□□□ -1.35
NKX6-1P78426 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.63□□□□□ -1.35
NKX6-1P78426 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC6.63□□□□□ -1.35
NKX6-1P78426 AL391262.1-201ENST00000556558 1992 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.63□□□□□ -1.35
NKX6-1P78426 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.63□□□□□ -1.35
NKX6-1P78426 AC233266.2-201ENST00000567067 528 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 MTND1P8-201ENST00000571424 950 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 PPIAP14-201ENST00000577627 496 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
NKX6-1P78426 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.63□□□□□ -1.35
NKX6-1P78426 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.63□□□□□ -1.35
NKX6-1P78426 AC024085.1-201ENST00000604299 432 ntBASIC6.63□□□□□ -1.35
NKX6-1P78426 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
NKX6-1P78426 AC069499.2-201ENST00000610665 382 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms