Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AP001120.4-201ENST00000590231 108 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AC020915.5-201ENST00000596836 964 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AC137695.2-201ENST00000603123 754 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 BNIP3P19-201ENST00000605397 577 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AL513218.1-201ENST00000606527 391 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 OR6L2P-201ENST00000608207 925 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AC005383.1-201ENST00000622689 534 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AL512283.1-201ENST00000606756 1384 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 AL139805.2-201ENST00000455305 2433 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 RBMX2P2-201ENST00000257020 946 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 RPL10P16-201ENST00000325000 645 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 HMGB3P1-201ENST00000393368 573 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 KIF4CP-201ENST00000422742 1279 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 MTCO1P57-201ENST00000432182 261 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 AC244505.2-201ENST00000435089 759 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 MAPRE1P3-201ENST00000435438 796 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 CDC42P2-201ENST00000448566 569 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 PGBD4P1-201ENST00000473644 407 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 RN7SL549P-201ENST00000478997 282 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 LINC00557-201ENST00000563184 1279 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 DNM1P31-201ENST00000564149 696 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 ULK4P1-202ENST00000565174 503 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 FXYD6P1-201ENST00000604857 285 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 SNORA35B-201ENST00000607417 129 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 AC097381.3-201ENST00000608962 462 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 AL162233.1-201ENST00000620014 944 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 AC034229.6-201ENST00000623704 224 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 AC090771.1-201ENST00000585803 1618 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 KYNUP2-201ENST00000582280 1329 ntBASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
AMBRA1Q9C0C7 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms