Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC073857.1-201ENST00000625082 1054 ntBASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 AL512353.3-201ENST00000417517 1326 ntBASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.41□□□□□ -1.38
C9orf40Q8IXQ3 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 AL512329.1-201ENST00000404600 1592 ntBASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 AP003175.1-201ENST00000641383 6658 ntBASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 OR10D1P-201ENST00000355343 936 ntBASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 MTND6P1-201ENST00000417434 424 ntBASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 AL845321.1-201ENST00000444603 348 ntBASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 NMNAT1P3-201ENST00000457517 888 ntBASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 AC083806.1-201ENST00000468934 316 ntBASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 RN7SL259P-201ENST00000478499 253 ntBASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 AC093325.1-201ENST00000508378 326 ntBASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 AC017037.4-201ENST00000624526 826 ntBASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 AC123769.2-201ENST00000624332 5984 ntBASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 UG0898H09-202ENST00000623646 7040 ntBASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
C9orf40Q8IXQ3 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 AC007938.1-201ENST00000562524 2902 ntBASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 AL031651.1-201ENST00000615357 1438 ntBASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
C9orf40Q8IXQ3 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AC061975.7-201ENST00000592016 2692 ntBASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AC012213.2-201ENST00000562917 4597 ntBASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 GOT2P2-201ENST00000450663 1251 ntBASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 RPL7AP71-201ENST00000451120 739 ntBASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 RPS26P11-201ENST00000463445 348 ntBASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 RPS26P6-201ENST00000475156 348 ntBASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.39□□□□□ -1.39
C9orf40Q8IXQ3 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms