Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNA5SP53-201ENST00000391299 120 ntBASIC6.5□□□□□ -1.37
RFC3P40938 RPL5P5-201ENST00000392009 893 ntBASIC6.5□□□□□ -1.37
RFC3P40938 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RFC3P40938 RPL5P34-201ENST00000426545 891 ntBASIC6.5□□□□□ -1.37
RFC3P40938 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.5□□□□□ -1.37
RFC3P40938 RPL5P9-201ENST00000448118 886 ntBASIC6.5□□□□□ -1.37
RFC3P40938 AC026336.1-201ENST00000466577 351 ntBASIC6.5□□□□□ -1.37
RFC3P40938 AC096754.1-201ENST00000508904 818 ntBASIC6.5□□□□□ -1.37
RFC3P40938 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.5□□□□□ -1.37
RFC3P40938 RN7SKP233-201ENST00000517005 110 ntBASIC6.5□□□□□ -1.37
RFC3P40938 RPL10P18-201ENST00000519384 309 ntBASIC6.5□□□□□ -1.37
RFC3P40938 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.5□□□□□ -1.37
RFC3P40938 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
RFC3P40938 AC069240.2-201ENST00000550242 609 ntBASIC6.5□□□□□ -1.37
RFC3P40938 OR5BK1P-201ENST00000550421 823 ntBASIC6.5□□□□□ -1.37
RFC3P40938 AL135978.1-201ENST00000553618 1266 ntBASIC6.5□□□□□ -1.37
RFC3P40938 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.5□□□□□ -1.37
RFC3P40938 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.5□□□□□ -1.37
RFC3P40938 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.5□□□□□ -1.37
RFC3P40938 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.5□□□□□ -1.37
RFC3P40938 AC048341.3-201ENST00000619323 491 ntBASIC6.5□□□□□ -1.37
RFC3P40938 AC005899.6-201ENST00000620729 297 ntBASIC6.5□□□□□ -1.37
RFC3P40938 AC008626.2-201ENST00000624425 248 ntBASIC6.5□□□□□ -1.37
RFC3P40938 MIR665-201ENST00000635949 72 ntBASIC6.5□□□□□ -1.37
RFC3P40938 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RFC3P40938 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.5□□□□□ -1.37
RFC3P40938 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
RFC3P40938 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RFC3P40938 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.5□□□□□ -1.37
RFC3P40938 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.5□□□□□ -1.37
RFC3P40938 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
RFC3P40938 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
RFC3P40938 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC6.5□□□□□ -1.37
RFC3P40938 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.49□□□□□ -1.37
RFC3P40938 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.49□□□□□ -1.37
RFC3P40938 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
RFC3P40938 AC013268.3-201ENST00000262716 2324 ntBASIC6.49□□□□□ -1.37
RFC3P40938 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.49□□□□□ -1.37
RFC3P40938 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC6.49□□□□□ -1.37
RFC3P40938 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.49□□□□□ -1.37
RFC3P40938 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.49□□□□□ -1.37
RFC3P40938 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
RFC3P40938 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.49□□□□□ -1.37
RFC3P40938 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.49□□□□□ -1.37
RFC3P40938 VDAC1P10-201ENST00000416715 891 ntBASIC6.49□□□□□ -1.37
RFC3P40938 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC6.49□□□□□ -1.37
RFC3P40938 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC6.49□□□□□ -1.37
RFC3P40938 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC6.49□□□□□ -1.37
RFC3P40938 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.49□□□□□ -1.37
RFC3P40938 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.49□□□□□ -1.37
RFC3P40938 GAPDHP53-201ENST00000458397 924 ntBASIC6.49□□□□□ -1.37
RFC3P40938 RPL23P10-201ENST00000468780 412 ntBASIC6.49□□□□□ -1.37
RFC3P40938 RPL23AP8-201ENST00000479812 475 ntBASIC6.49□□□□□ -1.37
RFC3P40938 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.49□□□□□ -1.37
RFC3P40938 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.49□□□□□ -1.37
RFC3P40938 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.49□□□□□ -1.37
RFC3P40938 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.49□□□□□ -1.37
RFC3P40938 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.49□□□□□ -1.37
RFC3P40938 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.49□□□□□ -1.37
RFC3P40938 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.49□□□□□ -1.37
RFC3P40938 ULK4P2-202ENST00000564187 492 ntBASIC6.49□□□□□ -1.37
RFC3P40938 AC068408.1-201ENST00000577406 1144 ntBASIC6.49□□□□□ -1.37
RFC3P40938 RN7SL32P-201ENST00000580514 281 ntBASIC6.49□□□□□ -1.37
RFC3P40938 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.49□□□□□ -1.37
RFC3P40938 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.49□□□□□ -1.37
RFC3P40938 AC087894.3-201ENST00000623682 349 ntBASIC6.49□□□□□ -1.37
RFC3P40938 AC005753.1-201ENST00000623837 618 ntBASIC6.49□□□□□ -1.37
RFC3P40938 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.49□□□□□ -1.37
RFC3P40938 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.49□□□□□ -1.37
RFC3P40938 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.49□□□□□ -1.37
RFC3P40938 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.49□□□□□ -1.37
RFC3P40938 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.49□□□□□ -1.37
RFC3P40938 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.49□□□□□ -1.37
RFC3P40938 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.49□□□□□ -1.37
RFC3P40938 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
RFC3P40938 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
RFC3P40938 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFC3P40938 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.49□□□□□ -1.37
RFC3P40938 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.49□□□□□ -1.37
RFC3P40938 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFC3P40938 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms