Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CXCL1P09341 AL391380.1-201ENST00000439300 1432 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 AC125232.1-201ENST00000452554 1408 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CXCL1P09341 AC232271.1-201ENST00000602455 2715 ntBASIC5.3□□□□□ -1.56
CXCL1P09341 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CXCL1P09341 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CXCL1P09341 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.29□□□□□ -1.56
CXCL1P09341 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CXCL1P09341 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC5.29□□□□□ -1.56
CXCL1P09341 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
CXCL1P09341 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CXCL1P09341 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.29□□□□□ -1.56
CXCL1P09341 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CXCL1P09341 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC5.29□□□□□ -1.56
CXCL1P09341 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.29□□□□□ -1.56
CXCL1P09341 AL049634.1-201ENST00000453770 1720 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
CXCL1P09341 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CXCL1P09341 AC010168.2-201ENST00000562691 5428 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CXCL1P09341 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CXCL1P09341 RBMX2P2-201ENST00000257020 946 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CXCL1P09341 RPL10P16-201ENST00000325000 645 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 FAM32BP-201ENST00000344033 333 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CXCL1P09341 RN7SKP63-201ENST00000363187 301 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 RNU6-1017P-201ENST00000363613 106 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CXCL1P09341 AMELY-202ENST00000383036 621 ntTSL 5 BASIC5.29□□□□□ -1.56
CXCL1P09341 RN7SKP131-201ENST00000410698 301 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 TMA16P2-201ENST00000413187 601 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 RPS26P38-201ENST00000414476 348 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 AC009413.1-201ENST00000414823 399 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 RPL7AP14-201ENST00000424041 802 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC5.29□□□□□ -1.56
CXCL1P09341 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.29□□□□□ -1.56
CXCL1P09341 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
CXCL1P09341 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC5.29□□□□□ -1.56
CXCL1P09341 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CXCL1P09341 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC5.29□□□□□ -1.56
CXCL1P09341 AC096743.1-201ENST00000485172 319 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 SERPINB5-205ENST00000489441 1268 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CXCL1P09341 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.29□□□□□ -1.56
CXCL1P09341 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.29□□□□□ -1.56
CXCL1P09341 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC5.29□□□□□ -1.56
CXCL1P09341 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.29□□□□□ -1.56
CXCL1P09341 EEF1B2P2-201ENST00000519625 676 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 AL109628.1-201ENST00000556877 366 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CXCL1P09341 AC034105.2-201ENST00000561866 238 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 TTC39A-AS1-202ENST00000568425 554 ntTSL 3 BASIC5.29□□□□□ -1.56
CXCL1P09341 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.29□□□□□ -1.56
CXCL1P09341 AC233699.1-201ENST00000569955 1168 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC5.29□□□□□ -1.56
CXCL1P09341 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC5.29□□□□□ -1.56
CXCL1P09341 MIR4664-201ENST00000583819 71 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 RN7SL192P-201ENST00000584303 299 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 AC010719.1-201ENST00000602992 747 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC5.29□□□□□ -1.56
CXCL1P09341 AC008626.1-201ENST00000604384 255 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 AC004852.1-201ENST00000605206 154 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 AC019322.2-201ENST00000605634 147 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 AL356052.1-201ENST00000605764 376 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC5.29□□□□□ -1.56
CXCL1P09341 AC005899.7-201ENST00000618199 588 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC5.29□□□□□ -1.56
CXCL1P09341 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC5.29□□□□□ -1.56
CXCL1P09341 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CXCL1P09341 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CXCL1P09341 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC5.29□□□□□ -1.56
CXCL1P09341 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CXCL1P09341 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CXCL1P09341 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CXCL1P09341 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CXCL1P09341 NLRP3P1-201ENST00000622303 1785 ntBASIC5.29□□□□□ -1.56
CXCL1P09341 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CXCL1P09341 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CXCL1P09341 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.29□□□□□ -1.56
CXCL1P09341 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.29□□□□□ -1.56
CXCL1P09341 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CXCL1P09341 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CXCL1P09341 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CXCL1P09341 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
CXCL1P09341 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CXCL1P09341 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CXCL1P09341 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.28□□□□□ -1.56
CXCL1P09341 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
CXCL1P09341 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CXCL1P09341 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CXCL1P09341 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CXCL1P09341 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.28□□□□□ -1.56
CXCL1P09341 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CXCL1P09341 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CXCL1P09341 TPTE2P2-201ENST00000403471 1466 ntBASIC5.28□□□□□ -1.56
CXCL1P09341 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CXCL1P09341 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CXCL1P09341 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms