Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC137056.2-201ENST00000624055 1958 ntBASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 RNA5SP427-201ENST00000365323 119 ntBASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 SLC25A5P7-201ENST00000406156 896 ntBASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 PPIL1P1-201ENST00000423936 499 ntBASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 OR51P1P-201ENST00000447547 942 ntBASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 RPS14P8-201ENST00000478778 369 ntBASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 LINC01085-203ENST00000511195 326 ntBASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 AC068790.1-201ENST00000536166 355 ntBASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 NDUFA3P4-201ENST00000560814 250 ntBASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 MIR5705-201ENST00000579870 89 ntBASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 AC005070.1-201ENST00000603744 365 ntBASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 AC078909.2-201ENST00000620584 398 ntBASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.15□□□□□ -1.42
RHBDD3Q9Y3P4 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RHBDD3Q9Y3P4 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.15□□□□□ -1.43
RHBDD3Q9Y3P4 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.15□□□□□ -1.43
RHBDD3Q9Y3P4 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RHBDD3Q9Y3P4 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.15□□□□□ -1.43
RHBDD3Q9Y3P4 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
RHBDD3Q9Y3P4 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RHBDD3Q9Y3P4 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.15□□□□□ -1.43
RHBDD3Q9Y3P4 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.15□□□□□ -1.43
RHBDD3Q9Y3P4 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.15□□□□□ -1.43
RHBDD3Q9Y3P4 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.15□□□□□ -1.43
RHBDD3Q9Y3P4 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 RNA5SP472-201ENST00000363868 119 ntBASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 SUMO2P8-201ENST00000434672 286 ntBASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 CYCSP44-201ENST00000448560 313 ntBASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 PRDX1P1-201ENST00000449329 596 ntBASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 RPSAP7-201ENST00000456871 885 ntBASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 RN7SL797P-201ENST00000486314 297 ntBASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 AC008417.1-201ENST00000510014 565 ntBASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 AC233290.1-201ENST00000553021 1186 ntBASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 AC068802.1-201ENST00000603420 732 ntBASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 AL049840.6-201ENST00000604583 345 ntBASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 AL513218.1-201ENST00000606527 391 ntBASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 AC104184.1-201ENST00000607513 721 ntBASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 OR5AU1-204ENST00000641822 1197 ntBASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDD3Q9Y3P4 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms