Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC011193.2-201ENST00000582638 367 ntBASIC7.21□□□□□ -1.26
PCDH9Q9HC56 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 AC012510.1-201ENST00000607946 759 ntBASIC7.21□□□□□ -1.26
PCDH9Q9HC56 AC026951.2-201ENST00000613847 241 ntBASIC7.21□□□□□ -1.26
PCDH9Q9HC56 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.2□□□□□ -1.26
PCDH9Q9HC56 OGFOD1P1-201ENST00000447552 1592 ntBASIC7.2□□□□□ -1.26
PCDH9Q9HC56 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 CYP2G2P-201ENST00000594920 1485 ntBASIC7.2□□□□□ -1.26
PCDH9Q9HC56 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 AC023886.2-201ENST00000321285 411 ntBASIC7.2□□□□□ -1.26
PCDH9Q9HC56 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 NPM1P31-201ENST00000399021 764 ntBASIC7.2□□□□□ -1.26
PCDH9Q9HC56 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 ANXA2P2-201ENST00000435128 1020 ntBASIC7.2□□□□□ -1.26
PCDH9Q9HC56 RPSAP41-201ENST00000439695 860 ntBASIC7.2□□□□□ -1.26
PCDH9Q9HC56 RPL29P7-201ENST00000440227 457 ntBASIC7.2□□□□□ -1.26
PCDH9Q9HC56 MYL6P4-201ENST00000477911 453 ntBASIC7.2□□□□□ -1.26
PCDH9Q9HC56 NACAP6-201ENST00000509572 622 ntBASIC7.2□□□□□ -1.26
PCDH9Q9HC56 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 AP001994.1-201ENST00000527539 826 ntBASIC7.2□□□□□ -1.26
PCDH9Q9HC56 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 AC090971.3-201ENST00000557871 1041 ntBASIC7.2□□□□□ -1.26
PCDH9Q9HC56 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 RN7SL42P-201ENST00000579786 294 ntBASIC7.2□□□□□ -1.26
PCDH9Q9HC56 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 COX6CP16-201ENST00000603667 216 ntBASIC7.2□□□□□ -1.26
PCDH9Q9HC56 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 AC104162.1-201ENST00000430831 2382 ntBASIC7.2□□□□□ -1.26
PCDH9Q9HC56 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 AC018765.1-201ENST00000623357 3446 ntBASIC7.2□□□□□ -1.26
PCDH9Q9HC56 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH9Q9HC56 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 AC083806.2-201ENST00000617795 2685 ntBASIC7.19□□□□□ -1.26
PCDH9Q9HC56 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 AL356361.1-201ENST00000400943 1459 ntBASIC7.19□□□□□ -1.26
PCDH9Q9HC56 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 MIR152-201ENST00000385212 87 ntBASIC7.19□□□□□ -1.26
PCDH9Q9HC56 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 MIR541-201ENST00000401360 84 ntBASIC7.19□□□□□ -1.26
PCDH9Q9HC56 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.19□□□□□ -1.26
PCDH9Q9HC56 RPLP0P1-201ENST00000457002 361 ntBASIC7.19□□□□□ -1.26
PCDH9Q9HC56 WBP1LP1-201ENST00000460451 896 ntBASIC7.19□□□□□ -1.26
PCDH9Q9HC56 TUBBP11-201ENST00000472255 252 ntBASIC7.19□□□□□ -1.26
PCDH9Q9HC56 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 HNRNPCP8-201ENST00000528764 888 ntBASIC7.19□□□□□ -1.26
PCDH9Q9HC56 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDH9Q9HC56 AL161931.1-201ENST00000612768 246 ntBASIC7.19□□□□□ -1.26
PCDH9Q9HC56 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms