Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 RPL36P18-201ENST00000419316 318 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 SFR1P2-201ENST00000421841 730 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC073310.1-201ENST00000423226 1033 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 GSTA6P-201ENST00000424144 582 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC074367.1-201ENST00000438685 1125 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 RPS29P5-201ENST00000452777 171 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC016489.1-201ENST00000461109 375 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 RN7SL213P-201ENST00000463482 317 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 RN7SL647P-201ENST00000485429 300 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC008496.1-201ENST00000509131 295 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC008677.3-201ENST00000519146 666 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 RPL10P18-201ENST00000519384 309 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC092133.1-201ENST00000565828 719 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 RN7SL786P-201ENST00000579130 298 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC090241.1-201ENST00000587732 621 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC139493.1-201ENST00000604368 397 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC242628.1-201ENST00000606810 391 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC016582.3-206ENST00000636547 207 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC074198.1-201ENST00000506546 1397 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 CYP2G2P-201ENST00000594920 1485 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AL162171.3-201ENST00000617439 3178 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 HDAC1P1-201ENST00000455482 1445 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AC020978.6-201ENST00000571197 3177 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 RNU1-16P-201ENST00000365477 164 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 OR7E91P-201ENST00000400027 866 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 EEF1A1P34-201ENST00000419888 1267 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 RPL23P10-201ENST00000468780 412 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AC117394.1-201ENST00000477323 567 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 CEACAMP3-202ENST00000483806 638 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AC095057.1-201ENST00000507583 168 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 RN7SKP242-201ENST00000515967 289 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 DCN-207ENST00000546370 586 ntTSL 3 BASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AC092368.2-201ENST00000565911 600 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 MTND1P8-201ENST00000571424 950 ntBASIC6.76□□□□□ -1.33
AMBRA1Q9C0C7 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms