Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 Y_RNA.110-201ENST00000363220 99 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 RNA5SP114-201ENST00000363780 113 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 RNU6-1055P-201ENST00000391085 107 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AF228730.1-201ENST00000397972 663 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 MTND4P13-201ENST00000402078 1023 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 RSL24D1P1-201ENST00000404972 493 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AL355143.1-201ENST00000407101 841 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AC024937.2-201ENST00000411669 1242 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AL157698.1-201ENST00000415190 1011 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 EIF4A1P13-201ENST00000415667 230 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 VDAC1P10-201ENST00000416715 891 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 MTND1P10-201ENST00000426108 832 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 EIF3LP2-201ENST00000457262 807 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 RPSAP48-201ENST00000466509 889 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 RPS3AP15-201ENST00000483874 781 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 RN7SL797P-201ENST00000486314 297 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AC105233.1-201ENST00000498840 781 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 ST13P6-201ENST00000522430 1102 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AL109741.3-201ENST00000561748 592 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AC007066.2-202ENST00000566531 914 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 FCGR1CP-201ENST00000579737 1127 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AC092032.1-201ENST00000603090 165 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AL391834.2-201ENST00000609982 546 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AC009283.1-201ENST00000615852 645 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AL353898.3-201ENST00000624679 1755 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 SALL4P7-201ENST00000555779 3120 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC093844.1-201ENST00000514910 1361 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 Z99129.4-201ENST00000624649 2435 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC018688.1-201ENST00000636528 1754 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC023632.6-201ENST00000624338 2177 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC011008.2-201ENST00000624866 3352 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 VDAC1P2-201ENST00000423609 850 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 OR52S1P-201ENST00000427016 937 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 RAB28P2-201ENST00000454299 641 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC091982.1-202ENST00000473923 343 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AP005202.1-201ENST00000489915 867 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 155.4 ms