Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 AC006042.1-201ENST00000449931 524 ntTSL 4 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 RPL7AP30-201ENST00000482859 796 ntBASIC7.34□□□□□ -1.23
LMO3Q8TAP4 PFN2-213ENST00000494827 793 ntTSL 4 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 OR4A13P-201ENST00000529316 942 ntBASIC7.34□□□□□ -1.23
LMO3Q8TAP4 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.34□□□□□ -1.23
LMO3Q8TAP4 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 AC004232.1-201ENST00000571388 208 ntBASIC7.34□□□□□ -1.23
LMO3Q8TAP4 RN7SL131P-201ENST00000579043 256 ntBASIC7.34□□□□□ -1.23
LMO3Q8TAP4 AL354718.1-201ENST00000619764 589 ntBASIC7.34□□□□□ -1.23
LMO3Q8TAP4 AC005753.1-201ENST00000623837 618 ntBASIC7.34□□□□□ -1.23
LMO3Q8TAP4 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 AC006453.3-201ENST00000635891 377 ntBASIC7.34□□□□□ -1.23
LMO3Q8TAP4 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
LMO3Q8TAP4 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.34□□□□□ -1.24
LMO3Q8TAP4 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.34□□□□□ -1.24
LMO3Q8TAP4 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 OR10D1P-201ENST00000355343 936 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 AL139135.1-201ENST00000412675 209 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 AL161742.1-201ENST00000418154 584 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 MTND1P10-201ENST00000426108 832 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 AL592114.2-201ENST00000440142 532 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 ST13P21-201ENST00000453250 1098 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 UOX-201ENST00000471089 899 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 RPL23AP80-201ENST00000495605 424 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 AC140063.1-201ENST00000541343 259 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 MIR378H-201ENST00000579966 83 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 AP003108.4-201ENST00000623917 878 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 AC106782.7-201ENST00000624024 418 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 AP000577.1-201ENST00000624366 878 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 AC133555.5-201ENST00000624430 418 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 AC123769.2-201ENST00000624332 5984 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 DLEU2L-201ENST00000371086 3555 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 RAD17P2-201ENST00000451754 1977 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.33□□□□□ -1.24
LMO3Q8TAP4 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.33□□□□□ -1.24
LMO3Q8TAP4 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LMO3Q8TAP4 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LMO3Q8TAP4 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC7.32□□□□□ -1.24
LMO3Q8TAP4 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LMO3Q8TAP4 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LMO3Q8TAP4 AL451064.2-201ENST00000623514 1654 ntBASIC7.32□□□□□ -1.24
LMO3Q8TAP4 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LMO3Q8TAP4 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms