Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
APOEP02649 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC7.38□□□□□ -1.23
APOEP02649 ENO1P4-201ENST00000416471 1785 ntBASIC7.38□□□□□ -1.23
APOEP02649 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.38□□□□□ -1.23
APOEP02649 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.38□□□□□ -1.23
APOEP02649 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
APOEP02649 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.37□□□□□ -1.23
APOEP02649 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.37□□□□□ -1.23
APOEP02649 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 AL669831.5-218ENST00000591702 1873 ntBASIC7.37□□□□□ -1.23
APOEP02649 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.37□□□□□ -1.23
APOEP02649 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.37□□□□□ -1.23
APOEP02649 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.37□□□□□ -1.23
APOEP02649 RN7SKP257-201ENST00000364525 309 ntBASIC7.37□□□□□ -1.23
APOEP02649 AC024937.2-201ENST00000411669 1242 ntBASIC7.37□□□□□ -1.23
APOEP02649 PPIAP23-201ENST00000420099 497 ntBASIC7.37□□□□□ -1.23
APOEP02649 FTLP17-201ENST00000432567 525 ntBASIC7.37□□□□□ -1.23
APOEP02649 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.37□□□□□ -1.23
APOEP02649 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.37□□□□□ -1.23
APOEP02649 RBMY3AP-201ENST00000449381 1145 ntBASIC7.37□□□□□ -1.23
APOEP02649 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.37□□□□□ -1.23
APOEP02649 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.37□□□□□ -1.23
APOEP02649 PABPC1P1-201ENST00000506347 591 ntBASIC7.37□□□□□ -1.23
APOEP02649 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC7.37□□□□□ -1.23
APOEP02649 AC107952.1-201ENST00000524200 376 ntBASIC7.37□□□□□ -1.23
APOEP02649 OR5M6P-201ENST00000530227 937 ntBASIC7.37□□□□□ -1.23
APOEP02649 AP004607.5-201ENST00000532034 217 ntBASIC7.37□□□□□ -1.23
APOEP02649 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.37□□□□□ -1.23
APOEP02649 AC079866.1-201ENST00000534985 1220 ntBASIC7.37□□□□□ -1.23
APOEP02649 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 AC126323.4-201ENST00000566935 234 ntBASIC7.37□□□□□ -1.23
APOEP02649 AL512430.4-201ENST00000603085 613 ntBASIC7.37□□□□□ -1.23
APOEP02649 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.37□□□□□ -1.23
APOEP02649 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.37□□□□□ -1.23
APOEP02649 AC027506.1-201ENST00000621395 198 ntBASIC7.37□□□□□ -1.23
APOEP02649 AC087894.3-201ENST00000623682 349 ntBASIC7.37□□□□□ -1.23
APOEP02649 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC7.37□□□□□ -1.23
APOEP02649 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC7.37□□□□□ -1.23
APOEP02649 AL596275.2-203ENST00000641951 371 ntBASIC7.37□□□□□ -1.23
APOEP02649 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.37□□□□□ -1.23
APOEP02649 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
APOEP02649 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.37□□□□□ -1.23
APOEP02649 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
APOEP02649 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
APOEP02649 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
APOEP02649 AC093844.1-201ENST00000514910 1361 ntBASIC7.36□□□□□ -1.23
APOEP02649 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
APOEP02649 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.36□□□□□ -1.23
APOEP02649 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.36□□□□□ -1.23
APOEP02649 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.36□□□□□ -1.23
APOEP02649 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.36□□□□□ -1.23
APOEP02649 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
APOEP02649 NPM1P14-201ENST00000343743 866 ntBASIC7.36□□□□□ -1.23
APOEP02649 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
APOEP02649 MIR27A-201ENST00000385073 78 ntBASIC7.36□□□□□ -1.23
APOEP02649 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.36□□□□□ -1.23
APOEP02649 MICG-208ENST00000416822 132 ntBASIC7.36□□□□□ -1.23
APOEP02649 RPL17P17-201ENST00000419491 557 ntBASIC7.36□□□□□ -1.23
APOEP02649 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.36□□□□□ -1.23
APOEP02649 GSTA6P-201ENST00000424144 582 ntBASIC7.36□□□□□ -1.23
APOEP02649 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC7.36□□□□□ -1.23
APOEP02649 SDHCP3-201ENST00000445371 506 ntBASIC7.36□□□□□ -1.23
APOEP02649 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC7.36□□□□□ -1.23
APOEP02649 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.36□□□□□ -1.23
APOEP02649 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.36□□□□□ -1.23
APOEP02649 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.36□□□□□ -1.23
APOEP02649 RN7SL160P-201ENST00000468558 284 ntBASIC7.36□□□□□ -1.23
APOEP02649 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.36□□□□□ -1.23
APOEP02649 AC105391.1-201ENST00000503155 1045 ntBASIC7.36□□□□□ -1.23
APOEP02649 AC100854.1-201ENST00000520351 341 ntBASIC7.36□□□□□ -1.23
APOEP02649 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC7.36□□□□□ -1.23
APOEP02649 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.36□□□□□ -1.23
APOEP02649 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.36□□□□□ -1.23
APOEP02649 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
APOEP02649 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC7.36□□□□□ -1.23
APOEP02649 DCN-215ENST00000550099 719 ntTSL 2 BASIC7.36□□□□□ -1.23
APOEP02649 RN7SL42P-201ENST00000579786 294 ntBASIC7.36□□□□□ -1.23
APOEP02649 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC7.36□□□□□ -1.23
APOEP02649 PRELID3BP3-201ENST00000584963 545 ntBASIC7.36□□□□□ -1.23
APOEP02649 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.36□□□□□ -1.23
APOEP02649 AL161420.1-201ENST00000619393 264 ntBASIC7.36□□□□□ -1.23
APOEP02649 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.36□□□□□ -1.23
APOEP02649 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.36□□□□□ -1.23
APOEP02649 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
APOEP02649 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms