Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 DDX43P1-201ENST00000510713 1763 ntBASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 RNA5SP176-201ENST00000390956 110 ntBASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 RPL9P21-201ENST00000392269 505 ntBASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 AL773545.3-201ENST00000414297 706 ntBASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 RPS10P14-201ENST00000440748 502 ntBASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 AL096803.1-201ENST00000456921 1021 ntBASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 RN7SL379P-201ENST00000479912 293 ntBASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 MTCO1P55-201ENST00000489829 745 ntBASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 AC008868.1-201ENST00000509786 737 ntBASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 AC017007.1-201ENST00000511960 415 ntBASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 IGLC4-201ENST00000517690 248 ntBASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 AL109628.1-201ENST00000556877 366 ntBASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 AL365223.1-201ENST00000574864 1297 ntBASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 MIR6883-201ENST00000614952 78 ntBASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 AC140479.4-205ENST00000636339 820 ntBASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 AC241584.2-201ENST00000637142 2090 ntBASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
C9orf40Q8IXQ3 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 HSPD1P1-201ENST00000503199 1726 ntBASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 MIR1204-201ENST00000408388 67 ntBASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 CHCHD4P5-201ENST00000436684 427 ntBASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 AC009244.1-201ENST00000450566 258 ntBASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 AC122714.1-201ENST00000502510 459 ntBASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 EEF1B2P2-201ENST00000519625 676 ntBASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 AC021820.1-201ENST00000525564 808 ntBASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 NXPE2P1-201ENST00000543705 726 ntBASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 AC100832.2-201ENST00000582080 776 ntBASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 MIR5010-201ENST00000582846 120 ntBASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 AC111186.1-201ENST00000604684 130 ntBASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 AC091059.2-201ENST00000623355 614 ntBASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 AC005355.2-201ENST00000625064 484 ntBASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.43□□□□□ -1.38
C9orf40Q8IXQ3 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms