Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC4.83□□□□□ -1.64
RPL39P62891 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC4.83□□□□□ -1.64
RPL39P62891 LSM3P3-201ENST00000436601 306 ntBASIC4.83□□□□□ -1.64
RPL39P62891 AL604028.2-201ENST00000437848 788 ntBASIC4.83□□□□□ -1.64
RPL39P62891 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC4.83□□□□□ -1.64
RPL39P62891 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC4.83□□□□□ -1.64
RPL39P62891 RPL34P34-201ENST00000465389 354 ntBASIC4.83□□□□□ -1.64
RPL39P62891 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC4.83□□□□□ -1.64
RPL39P62891 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC4.83□□□□□ -1.64
RPL39P62891 AC114786.3-201ENST00000509304 705 ntBASIC4.83□□□□□ -1.64
RPL39P62891 AC008417.1-201ENST00000510014 565 ntBASIC4.83□□□□□ -1.64
RPL39P62891 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC4.83□□□□□ -1.64
RPL39P62891 AC114801.1-201ENST00000512633 297 ntBASIC4.83□□□□□ -1.64
RPL39P62891 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC4.83□□□□□ -1.64
RPL39P62891 AC087752.2-201ENST00000521219 281 ntBASIC4.83□□□□□ -1.64
RPL39P62891 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC4.83□□□□□ -1.64
RPL39P62891 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
RPL39P62891 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC4.83□□□□□ -1.64
RPL39P62891 MIR4470-201ENST00000583453 72 ntBASIC4.83□□□□□ -1.64
RPL39P62891 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC4.83□□□□□ -1.64
RPL39P62891 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC4.83□□□□□ -1.64
RPL39P62891 AC091768.1-201ENST00000609258 930 ntBASIC4.83□□□□□ -1.64
RPL39P62891 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
RPL39P62891 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC4.83□□□□□ -1.64
RPL39P62891 AL049541.2-201ENST00000626377 555 ntBASIC4.83□□□□□ -1.64
RPL39P62891 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 DDX10P2-201ENST00000417796 2614 ntBASIC4.83□□□□□ -1.64
RPL39P62891 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RPL39P62891 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC4.83□□□□□ -1.64
RPL39P62891 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RPL39P62891 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RPL39P62891 AP002800.1-201ENST00000624982 2225 ntBASIC4.82□□□□□ -1.64
RPL39P62891 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC4.82□□□□□ -1.64
RPL39P62891 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC4.82□□□□□ -1.64
RPL39P62891 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RPL39P62891 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
RPL39P62891 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RPL39P62891 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
RPL39P62891 MKI67P1-201ENST00000604297 1460 ntBASIC4.82□□□□□ -1.64
RPL39P62891 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RPL39P62891 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC4.82□□□□□ -1.64
RPL39P62891 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
RPL39P62891 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC4.82□□□□□ -1.64
RPL39P62891 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
RPL39P62891 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC4.82□□□□□ -1.64
RPL39P62891 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC4.82□□□□□ -1.64
RPL39P62891 RNU1-38P-201ENST00000362817 144 ntBASIC4.82□□□□□ -1.64
RPL39P62891 RNA5SP483-201ENST00000363431 118 ntBASIC4.82□□□□□ -1.64
RPL39P62891 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RPL39P62891 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RPL39P62891 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RPL39P62891 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 RN7SKP85-201ENST00000411349 318 ntBASIC4.82□□□□□ -1.64
RPL39P62891 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC4.82□□□□□ -1.64
RPL39P62891 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC4.82□□□□□ -1.64
RPL39P62891 MTND4LP17-201ENST00000414607 293 ntBASIC4.82□□□□□ -1.64
RPL39P62891 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC4.82□□□□□ -1.64
RPL39P62891 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
RPL39P62891 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 OR5P4P-201ENST00000424698 917 ntBASIC4.82□□□□□ -1.64
RPL39P62891 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC4.82□□□□□ -1.64
RPL39P62891 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC4.82□□□□□ -1.64
RPL39P62891 AC093799.1-201ENST00000452411 499 ntBASIC4.82□□□□□ -1.64
RPL39P62891 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RPL39P62891 AC013429.1-201ENST00000456604 422 ntBASIC4.82□□□□□ -1.64
RPL39P62891 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC4.82□□□□□ -1.64
RPL39P62891 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RPL39P62891 EFCAB10-204ENST00000485614 799 ntTSL 5 BASIC4.82□□□□□ -1.64
RPL39P62891 RPL17P2-201ENST00000491913 451 ntBASIC4.82□□□□□ -1.64
RPL39P62891 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC4.82□□□□□ -1.64
RPL39P62891 SNORA58-201ENST00000505219 137 ntBASIC4.82□□□□□ -1.64
RPL39P62891 AF186996.3-201ENST00000509527 964 ntBASIC4.82□□□□□ -1.64
RPL39P62891 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC4.82□□□□□ -1.64
RPL39P62891 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC4.82□□□□□ -1.64
RPL39P62891 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC4.82□□□□□ -1.64
RPL39P62891 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC4.82□□□□□ -1.64
RPL39P62891 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms