Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC016583.1-201ENST00000624221 2431 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 SPRR2D-204ENST00000368758 782 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 TRAV8-2-201ENST00000390434 566 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 SNORA3.1-201ENST00000408166 111 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 Z98751.1-201ENST00000413827 381 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 EEF1A1P29-201ENST00000416082 1096 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 UQCRHP1-204ENST00000424609 274 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 SNRPCP1-201ENST00000433292 458 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 HACL1-206ENST00000435217 1269 ntTSL 2 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 MED28P3-201ENST00000444288 531 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 RPL17P1-201ENST00000445304 536 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 OR4A47-201ENST00000446524 1064 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC073336.1-201ENST00000448767 664 ntTSL 3 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 SEPT7P3-201ENST00000455017 621 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AL133480.2-201ENST00000456723 487 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 CCNJP2-201ENST00000457810 1163 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AF186996.8-201ENST00000463158 907 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 RN7SL55P-201ENST00000464534 297 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC018638.2-201ENST00000471258 403 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC004917.1-202ENST00000475791 760 ntTSL 3 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC005017.1-201ENST00000482002 490 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 PDCD10-218ENST00000497056 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 RN7SL775P-201ENST00000498361 336 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AL445187.1-201ENST00000502685 260 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 NPM1P27-201ENST00000502784 830 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 IGLV7-35-201ENST00000523314 340 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AP000879.1-201ENST00000526174 976 ntTSL 5 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 DCN-209ENST00000546745 1026 ntTSL 3 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 CYP19A1-210ENST00000557858 832 ntTSL 2 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 SRP14-205ENST00000559081 578 ntTSL 2 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AL390726.5-202ENST00000564800 256 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC005828.2-201ENST00000580253 562 ntTSL 4 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 MIR4750-201ENST00000584564 56 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC090213.1-201ENST00000586841 546 ntTSL 4 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC008385.1-201ENST00000604421 355 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC093458.1-201ENST00000608912 222 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC093726.2-201ENST00000609134 679 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 FAM238B-204ENST00000612040 423 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC007450.2-201ENST00000614160 290 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC010087.1-201ENST00000618630 438 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC068234.2-201ENST00000619646 522 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 THRB-AS1-209ENST00000628911 850 ntTSL 5 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 LINC01002-216ENST00000632351 572 ntTSL 5 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC010325.1-203ENST00000636757 380 ntAPPRIS P5 TSL 5 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC020656.2-201ENST00000613291 5309 ntBASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 FAM114A1-206ENST00000515037 1431 ntTSL 2 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 WAC-209ENST00000428935 1320 ntTSL 2 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LINC01558Q9Y6Z2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.4□□□□□ -1.86
LINC01558Q9Y6Z2 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LINC01558Q9Y6Z2 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC3.4□□□□□ -1.86
LINC01558Q9Y6Z2 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC3.4□□□□□ -1.86
LINC01558Q9Y6Z2 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
LINC01558Q9Y6Z2 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC3.4□□□□□ -1.86
LINC01558Q9Y6Z2 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
LINC01558Q9Y6Z2 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
LINC01558Q9Y6Z2 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
LINC01558Q9Y6Z2 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
LINC01558Q9Y6Z2 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms