Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 EEF1B2P2-201ENST00000519625 676 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 GLYATL1P4-201ENST00000529326 906 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 MIR1273F-201ENST00000580581 99 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 AP006587.6-201ENST00000582128 1091 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 GTF2IP6-201ENST00000583143 541 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 AC087575.1-201ENST00000585087 229 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 AC063962.1-201ENST00000608199 521 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 AP002345.2-201ENST00000609961 904 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 AC127071.1-201ENST00000624997 712 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 OR7E161P-202ENST00000641994 1033 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 AC125232.1-201ENST00000452554 1408 ntBASIC7.25□□□□□ -1.25
PCDH9Q9HC56 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
PCDH9Q9HC56 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 AL021877.2-201ENST00000624442 10684 ntBASIC7.24□□□□□ -1.25
PCDH9Q9HC56 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 SNORA70G-201ENST00000383923 142 ntBASIC7.24□□□□□ -1.25
PCDH9Q9HC56 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 AC009237.4-201ENST00000441078 238 ntBASIC7.24□□□□□ -1.25
PCDH9Q9HC56 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 DBIL5P2-201ENST00000443827 253 ntBASIC7.24□□□□□ -1.25
PCDH9Q9HC56 PABPC1P10-201ENST00000464731 381 ntBASIC7.24□□□□□ -1.25
PCDH9Q9HC56 AC096743.1-201ENST00000485172 319 ntBASIC7.24□□□□□ -1.25
PCDH9Q9HC56 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 AC060766.1-201ENST00000590824 627 ntBASIC7.24□□□□□ -1.25
PCDH9Q9HC56 AC005070.2-201ENST00000604391 260 ntBASIC7.24□□□□□ -1.25
PCDH9Q9HC56 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDH9Q9HC56 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 U3.14-201ENST00000365363 227 ntBASIC7.23□□□□□ -1.25
PCDH9Q9HC56 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 RPS3AP5-201ENST00000389400 821 ntBASIC7.23□□□□□ -1.25
PCDH9Q9HC56 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 AL691447.1-201ENST00000419456 387 ntBASIC7.23□□□□□ -1.25
PCDH9Q9HC56 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 BTG3P1-201ENST00000435859 716 ntBASIC7.23□□□□□ -1.25
PCDH9Q9HC56 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 OR52U1P-201ENST00000439752 923 ntBASIC7.23□□□□□ -1.25
PCDH9Q9HC56 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 RPL21P33-201ENST00000444831 484 ntBASIC7.23□□□□□ -1.25
PCDH9Q9HC56 RPL23AP8-201ENST00000479812 475 ntBASIC7.23□□□□□ -1.25
PCDH9Q9HC56 AC096754.1-201ENST00000508904 818 ntBASIC7.23□□□□□ -1.25
PCDH9Q9HC56 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 AP003084.1-201ENST00000524828 742 ntBASIC7.23□□□□□ -1.25
PCDH9Q9HC56 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms