Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 TDGF1P6-201ENST00000463873 448 ntBASIC6.11□□□□□ -1.43
SSX3Q99909 RN7SL332P-201ENST00000482163 254 ntBASIC6.11□□□□□ -1.43
SSX3Q99909 CREM-234ENST00000484283 660 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX3Q99909 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX3Q99909 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX3Q99909 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX3Q99909 SNX18P27-201ENST00000523611 779 ntBASIC6.11□□□□□ -1.43
SSX3Q99909 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.11□□□□□ -1.43
SSX3Q99909 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC6.11□□□□□ -1.43
SSX3Q99909 COX6CP11-201ENST00000555293 229 ntBASIC6.11□□□□□ -1.43
SSX3Q99909 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC6.11□□□□□ -1.43
SSX3Q99909 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX3Q99909 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX3Q99909 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX3Q99909 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC6.11□□□□□ -1.43
SSX3Q99909 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX3Q99909 CYCSP1-201ENST00000604815 315 ntBASIC6.11□□□□□ -1.43
SSX3Q99909 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.11□□□□□ -1.43
SSX3Q99909 AC034229.2-201ENST00000566945 2508 ntBASIC6.11□□□□□ -1.43
SSX3Q99909 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SSX3Q99909 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.11□□□□□ -1.43
SSX3Q99909 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.11□□□□□ -1.43
SSX3Q99909 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SSX3Q99909 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SSX3Q99909 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.11□□□□□ -1.43
SSX3Q99909 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SSX3Q99909 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 CDY11P-201ENST00000447168 1651 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.1□□□□□ -1.43
SSX3Q99909 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SSX3Q99909 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 CYP2G2P-201ENST00000594920 1485 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SSX3Q99909 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 KYNUP1-201ENST00000466683 1406 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 TRIM60P14-201ENST00000513444 1419 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.1□□□□□ -1.43
SSX3Q99909 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 RN7SKP211-201ENST00000363328 315 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 RNA5SP514-201ENST00000363717 111 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 GSTA10P-201ENST00000412182 576 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 RPL12P10-201ENST00000413498 498 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 RPL34P19-201ENST00000415903 342 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX3Q99909 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.1□□□□□ -1.43
SSX3Q99909 GRPEL2P2-201ENST00000421856 670 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 SNX18P3-201ENST00000424993 835 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 AL121578.1-201ENST00000428051 892 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.1□□□□□ -1.43
SSX3Q99909 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.1□□□□□ -1.43
SSX3Q99909 AL929410.2-201ENST00000451170 189 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 AC013429.1-201ENST00000456604 422 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC6.1□□□□□ -1.43
SSX3Q99909 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.1□□□□□ -1.43
SSX3Q99909 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 AC111000.1-201ENST00000514545 713 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC6.1□□□□□ -1.43
SSX3Q99909 IGLVI-42-201ENST00000522485 381 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX3Q99909 AP003080.1-202ENST00000526526 915 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.1□□□□□ -1.43
SSX3Q99909 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.1□□□□□ -1.43
SSX3Q99909 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SSX3Q99909 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.1□□□□□ -1.43
SSX3Q99909 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC6.1□□□□□ -1.43
SSX3Q99909 AC093283.1-201ENST00000565306 1075 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.1□□□□□ -1.43
SSX3Q99909 MIR4437-201ENST00000581331 60 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX3Q99909 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC6.1□□□□□ -1.43
SSX3Q99909 AC016629.2-201ENST00000597341 199 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 AC005518.2-201ENST00000603254 282 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 AC008385.1-201ENST00000604421 355 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 AC004852.1-201ENST00000605206 154 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 AL161912.3-201ENST00000605404 628 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SSX3Q99909 AC009120.7-201ENST00000623452 780 ntBASIC6.1□□□□□ -1.43
SSX3Q99909 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.1□□□□□ -1.43
SSX3Q99909 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SSX3Q99909 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
SSX3Q99909 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms