Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MAPK10-323ENST00000641493 3207 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 MIR640-201ENST00000385086 96 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 AC091390.2-201ENST00000432573 374 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 ATP5LP4-201ENST00000434169 307 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 RPL14P5-201ENST00000436474 730 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 RPL29P7-201ENST00000440227 457 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 GAPDHP53-201ENST00000458397 924 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 AC114982.2-201ENST00000461396 358 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 RPL34P34-201ENST00000465389 354 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 MYL6P4-201ENST00000477911 453 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 AC137549.1-201ENST00000514243 533 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 LDHBP3-201ENST00000514909 822 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 VDAC2P2-201ENST00000544463 901 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 MIR1273F-201ENST00000580581 99 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 MIR4786-201ENST00000583954 80 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 AC026790.2-201ENST00000606282 430 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 AC012510.1-201ENST00000607946 759 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 MIR6726-201ENST00000613751 61 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 FKBP1AP4-201ENST00000631775 336 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 AC092821.3-202ENST00000641304 2767 ntBASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZNF549Q6P9A3 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 CDY19P-201ENST00000411668 1613 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 CDY18P-201ENST00000438294 1609 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 AC063923.1-201ENST00000478982 1619 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 NPM1P31-201ENST00000399021 764 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 RN7SKP271-201ENST00000410528 320 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 VDAC1P10-201ENST00000416715 891 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 CDK7P1-201ENST00000434574 693 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 ANXA2P2-201ENST00000435128 1020 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 RPSAP41-201ENST00000439695 860 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 AC092421.1-201ENST00000448148 418 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 MED28P7-201ENST00000456611 530 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 AL928654.1-201ENST00000476081 354 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 CEACAMP3-202ENST00000483806 638 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 AC106760.2-201ENST00000504159 619 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 RN7SKP233-201ENST00000517005 110 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 OR5M6P-201ENST00000530227 937 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 OR7E161P-201ENST00000533722 967 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 AC079866.1-201ENST00000534985 1220 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 PSMC1P8-201ENST00000536820 1296 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 GTF2IP6-201ENST00000583143 541 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 EXOSC3P2-201ENST00000594464 497 ntBASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.92□□□□□ -1.3
ZNF549Q6P9A3 AC092032.1-201ENST00000603090 165 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms