Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
FREM3P0C091 RN7SKP191-201ENST00000364713 306 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 AC006511.2-201ENST00000388966 660 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
FREM3P0C091 AL773545.3-201ENST00000414297 706 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 AC000089.1-201ENST00000424559 801 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.33□□□□□ -1.4
FREM3P0C091 AL121578.2-201ENST00000448797 447 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 GOT2P2-201ENST00000450663 1251 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 SLAMF6P1-201ENST00000451067 602 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.33□□□□□ -1.4
FREM3P0C091 AC008868.1-201ENST00000509786 737 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.33□□□□□ -1.4
FREM3P0C091 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.33□□□□□ -1.4
FREM3P0C091 PHBP2-201ENST00000532859 806 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.33□□□□□ -1.4
FREM3P0C091 MIR378C-201ENST00000578683 81 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.33□□□□□ -1.4
FREM3P0C091 RN7SL66P-201ENST00000582099 264 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.33□□□□□ -1.4
FREM3P0C091 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.33□□□□□ -1.4
FREM3P0C091 MIR8089-201ENST00000620165 82 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 AC087894.3-201ENST00000623682 349 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 AC073857.1-201ENST00000625082 1054 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 AC011471.4-201ENST00000638271 216 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
FREM3P0C091 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
FREM3P0C091 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.33□□□□□ -1.4
FREM3P0C091 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
FREM3P0C091 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
FREM3P0C091 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.33□□□□□ -1.4
FREM3P0C091 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
FREM3P0C091 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
FREM3P0C091 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
FREM3P0C091 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC6.33□□□□□ -1.4
FREM3P0C091 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
FREM3P0C091 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
FREM3P0C091 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
FREM3P0C091 TATDN2P3-201ENST00000452855 3665 ntBASIC6.33□□□□□ -1.4
FREM3P0C091 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
FREM3P0C091 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FREM3P0C091 MIR187-201ENST00000385062 109 ntBASIC6.32□□□□□ -1.4
FREM3P0C091 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.32□□□□□ -1.4
FREM3P0C091 AC018804.1-201ENST00000430381 618 ntBASIC6.32□□□□□ -1.4
FREM3P0C091 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.32□□□□□ -1.4
FREM3P0C091 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.32□□□□□ -1.4
FREM3P0C091 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.32□□□□□ -1.4
FREM3P0C091 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.32□□□□□ -1.4
FREM3P0C091 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC6.32□□□□□ -1.4
FREM3P0C091 RN7SKP64-201ENST00000517206 328 ntBASIC6.32□□□□□ -1.4
FREM3P0C091 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.32□□□□□ -1.4
FREM3P0C091 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.32□□□□□ -1.4
FREM3P0C091 AP006587.5-201ENST00000532033 739 ntBASIC6.32□□□□□ -1.4
FREM3P0C091 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FREM3P0C091 MELK-207ENST00000536860 2342 ntTSL 2 BASIC6.32□□□□□ -1.4
FREM3P0C091 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.32□□□□□ -1.4
FREM3P0C091 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.32□□□□□ -1.4
FREM3P0C091 AL109628.1-201ENST00000556877 366 ntBASIC6.32□□□□□ -1.4
FREM3P0C091 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.32□□□□□ -1.4
FREM3P0C091 U91328.4-201ENST00000608919 517 ntBASIC6.32□□□□□ -1.4
FREM3P0C091 MIR6885-201ENST00000612241 66 ntBASIC6.32□□□□□ -1.4
FREM3P0C091 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.32□□□□□ -1.4
FREM3P0C091 AC116631.1-202ENST00000640984 683 ntBASIC6.32□□□□□ -1.4
FREM3P0C091 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FREM3P0C091 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.32□□□□□ -1.4
FREM3P0C091 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.32□□□□□ -1.4
FREM3P0C091 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FREM3P0C091 AC007993.1-201ENST00000621298 2430 ntBASIC6.32□□□□□ -1.4
FREM3P0C091 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
FREM3P0C091 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
FREM3P0C091 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
FREM3P0C091 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FREM3P0C091 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FREM3P0C091 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FREM3P0C091 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
FREM3P0C091 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FREM3P0C091 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC6.32□□□□□ -1.4
FREM3P0C091 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FREM3P0C091 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
FREM3P0C091 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FREM3P0C091 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FREM3P0C091 DLEU2L-201ENST00000371086 3555 ntBASIC6.32□□□□□ -1.4
FREM3P0C091 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.32□□□□□ -1.4
FREM3P0C091 THAP12P3-201ENST00000456373 2266 ntBASIC6.32□□□□□ -1.4
FREM3P0C091 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.32□□□□□ -1.4
FREM3P0C091 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FREM3P0C091 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FREM3P0C091 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.32□□□□□ -1.4
FREM3P0C091 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
FREM3P0C091 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
FREM3P0C091 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.32□□□□□ -1.4
FREM3P0C091 AC087499.3-202ENST00000441215 1173 ntBASIC6.32□□□□□ -1.4
FREM3P0C091 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.32□□□□□ -1.4
FREM3P0C091 AL390728.3-201ENST00000452704 270 ntBASIC6.32□□□□□ -1.4
FREM3P0C091 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.32□□□□□ -1.4
FREM3P0C091 AC021146.11-201ENST00000503319 491 ntBASIC6.32□□□□□ -1.4
FREM3P0C091 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
FREM3P0C091 AC113191.1-201ENST00000517759 403 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms