Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC009963.4-201ENST00000448535 339 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC5.34□□□□□ -1.55
CXCL1P09341 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC5.34□□□□□ -1.55
CXCL1P09341 AC107029.1-201ENST00000484675 465 ntTSL 2 BASIC5.34□□□□□ -1.55
CXCL1P09341 ADAM20P2-201ENST00000515830 1273 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 AP001767.2-201ENST00000527291 382 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC5.34□□□□□ -1.55
CXCL1P09341 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC5.34□□□□□ -1.55
CXCL1P09341 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC5.34□□□□□ -1.55
CXCL1P09341 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC5.34□□□□□ -1.55
CXCL1P09341 AL358334.1-201ENST00000557152 174 ntTSL 5 BASIC5.34□□□□□ -1.55
CXCL1P09341 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC5.34□□□□□ -1.55
CXCL1P09341 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC5.34□□□□□ -1.55
CXCL1P09341 LINC00674-202ENST00000590734 160 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC5.34□□□□□ -1.55
CXCL1P09341 ZNF98-205ENST00000601553 566 ntTSL 3 BASIC5.34□□□□□ -1.55
CXCL1P09341 AC022239.4-201ENST00000602626 504 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 AC111186.1-201ENST00000604684 130 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 YTHDF2P1-201ENST00000604759 1271 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 AF146191.1-201ENST00000604941 889 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC5.34□□□□□ -1.55
CXCL1P09341 AC016394.1-201ENST00000608444 833 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC5.34□□□□□ -1.55
CXCL1P09341 AC245407.2-201ENST00000614199 451 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 AC005383.1-201ENST00000622689 534 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 AC090373.1-201ENST00000623955 603 ntBASIC5.34□□□□□ -1.55
CXCL1P09341 METAP1-212ENST00000625963 147 ntTSL 5 BASIC5.34□□□□□ -1.55
CXCL1P09341 WDR11-AS1-207ENST00000630905 769 ntTSL 2 BASIC5.34□□□□□ -1.55
CXCL1P09341 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.34□□□□□ -1.55
CXCL1P09341 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
CXCL1P09341 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
CXCL1P09341 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CXCL1P09341 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CXCL1P09341 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.34□□□□□ -1.56
CXCL1P09341 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
CXCL1P09341 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CXCL1P09341 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
CXCL1P09341 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CXCL1P09341 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.34□□□□□ -1.56
CXCL1P09341 AC110373.1-201ENST00000505994 3505 ntBASIC5.34□□□□□ -1.56
CXCL1P09341 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC5.33□□□□□ -1.56
CXCL1P09341 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CXCL1P09341 AC092724.1-201ENST00000624623 3397 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CXCL1P09341 AL355312.2-201ENST00000455607 1541 ntTSL 5 BASIC5.33□□□□□ -1.56
CXCL1P09341 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC5.33□□□□□ -1.56
CXCL1P09341 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CXCL1P09341 MSL3P1-202ENST00000440028 1468 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 AC018628.1-201ENST00000624147 3819 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CXCL1P09341 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CXCL1P09341 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CXCL1P09341 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CXCL1P09341 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CXCL1P09341 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CXCL1P09341 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CXCL1P09341 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CXCL1P09341 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CXCL1P09341 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CXCL1P09341 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CXCL1P09341 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.33□□□□□ -1.56
CXCL1P09341 RNA5SP463-201ENST00000363030 120 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CXCL1P09341 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CXCL1P09341 RFKP1-201ENST00000400940 428 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 RPSAP42-201ENST00000403415 878 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 AC116036.1-201ENST00000412199 367 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 OR13D3P-201ENST00000412501 937 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 AC020983.1-201ENST00000417063 543 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 CDKN2AIPNLP3-201ENST00000418361 309 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 VNN3-208ENST00000427187 1214 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CXCL1P09341 DDX11L10-201ENST00000430178 571 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.33□□□□□ -1.56
CXCL1P09341 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC5.33□□□□□ -1.56
CXCL1P09341 SAP18P3-201ENST00000449663 396 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 KIF3AP1-201ENST00000454055 611 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 RN7SL335P-201ENST00000482790 304 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 SNORA70.23-201ENST00000517218 151 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.33□□□□□ -1.56
CXCL1P09341 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CXCL1P09341 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.33□□□□□ -1.56
CXCL1P09341 OR7E96P-201ENST00000530816 976 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 TBX5-AS1-203ENST00000531202 822 ntTSL 2 BASIC5.33□□□□□ -1.56
CXCL1P09341 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CXCL1P09341 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
CXCL1P09341 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC5.33□□□□□ -1.56
CXCL1P09341 AC009997.1-201ENST00000557862 129 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CXCL1P09341 RBM22P13-201ENST00000569805 1244 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 MIR3159-201ENST00000584572 74 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC5.33□□□□□ -1.56
CXCL1P09341 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC5.33□□□□□ -1.56
CXCL1P09341 AC063962.1-201ENST00000608199 521 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 STARD13-AS-247ENST00000610879 779 ntTSL 5 BASIC5.33□□□□□ -1.56
CXCL1P09341 TCL6_3.1-201ENST00000619064 137 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC5.33□□□□□ -1.56
CXCL1P09341 ENSA-215ENST00000638926 360 ntTSL 5 BASIC5.33□□□□□ -1.56
CXCL1P09341 HLA-B-257ENST00000640094 147 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CXCL1P09341 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms