Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 SNORA70.8-201ENST00000384231 136 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 RNU6-1055P-201ENST00000391085 107 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 SUMO2P13-201ENST00000403109 272 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 RBMY2JP-201ENST00000425544 1059 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 CT45A11P-201ENST00000448043 1134 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AC117395.2-201ENST00000463122 1128 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AC079944.1-201ENST00000485426 495 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 LINC01085-203ENST00000511195 326 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AC016559.1-201ENST00000511420 199 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AC068790.1-201ENST00000536166 355 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 MIR3135A-201ENST00000578460 77 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 STARD6-204ENST00000584040 660 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 RPSAP66-201ENST00000592196 606 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AC023513.1-201ENST00000604396 691 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AP001554.1-201ENST00000604533 376 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AC078909.2-201ENST00000620584 398 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AL117378.2-201ENST00000622916 1337 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AL157713.1-201ENST00000379752 1531 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 AC079949.2-201ENST00000617117 2933 ntBASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DRB4X5D2U9 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 AC122713.2-201ENST00000624942 3335 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 AC090771.1-201ENST00000585803 1618 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 AC061975.5-201ENST00000584928 1441 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 FTH1P26-201ENST00000406512 701 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 GSTA6P-201ENST00000424144 582 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 UQCRHP1-204ENST00000424609 274 ntBASIC5.35□□□□□ -1.55
HLA-DRB4X5D2U9 NPM1P30-201ENST00000425092 828 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms