Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SNORA30B-201ENST00000365319 129 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 AL353625.1-202ENST00000366273 571 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 SUN5-203ENST00000375523 1153 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 Y_RNA.450-201ENST00000384198 113 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 RNU6-332P-201ENST00000391193 108 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 EGFLAM-205ENST00000397210 1299 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
LRCH3Q96II8 RPSAP44-201ENST00000406712 884 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 HSPD1P12-201ENST00000429127 1069 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 AC025262.1-201ENST00000434563 589 ntTSL 5 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 Z99127.2-201ENST00000441426 334 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 AC068531.1-201ENST00000502398 195 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 AC136424.1-201ENST00000518425 542 ntTSL 4 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 OR5BB1P-201ENST00000528843 939 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 HIGD1AP9-201ENST00000550710 279 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 AC125611.2-201ENST00000551907 647 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 AADACP1-206ENST00000561502 1193 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 ANP32BP1-201ENST00000564205 1297 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 BNIP3P11-201ENST00000603878 563 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 AC092354.1-201ENST00000606057 376 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 AL136985.2-201ENST00000607372 535 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
LRCH3Q96II8 AC040896.1-201ENST00000613819 479 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 AC091834.1-201ENST00000614543 472 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 AC002553.4-201ENST00000616896 331 ntBASIC9.4□□□□□ -0.9
LRCH3Q96II8 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 DHX29-201ENST00000251636 4502 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
LRCH3Q96II8 GPN1-210ENST00000515877 1646 ntTSL 5 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 MTMR2-204ENST00000409459 3420 ntTSL 5 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 INTS6-215ENST00000490542 2307 ntTSL 5 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 AL008729.1-203ENST00000606150 2305 ntTSL 2 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LRCH3Q96II8 SAG-201ENST00000409110 1591 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
LRCH3Q96II8 CMSS1-201ENST00000421999 4330 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
LRCH3Q96II8 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.91
LRCH3Q96II8 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
LRCH3Q96II8 SLC16A1P1-201ENST00000486743 1510 ntBASIC9.4□□□□□ -0.91
LRCH3Q96II8 CD40LG-202ENST00000370629 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
LRCH3Q96II8 HRH4-201ENST00000256906 3668 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
LRCH3Q96II8 MAGEB16-201ENST00000399985 1667 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 LINC01940-201ENST00000455228 3489 ntTSL 2 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 RHAG-202ENST00000371175 1912 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
LRCH3Q96II8 CSNK2A1-202ENST00000349736 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LRCH3Q96II8 MSC-AS1-201ENST00000457356 4220 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LRCH3Q96II8 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LRCH3Q96II8 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LRCH3Q96II8 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
LRCH3Q96II8 Y_RNA.453-201ENST00000384223 109 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 Y_RNA.460-201ENST00000384255 102 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
LRCH3Q96II8 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 AC023141.1-201ENST00000419418 379 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 AC233728.2-201ENST00000425348 757 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 SNX19-202ENST00000426933 888 ntTSL 2 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 AL606752.1-201ENST00000435442 666 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 MTND3P1-201ENST00000441336 220 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 AC093019.1-201ENST00000443135 252 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 AC105393.1-202ENST00000449621 598 ntTSL 3 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 FTH1P7-201ENST00000450676 552 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 VNN3-210ENST00000450865 596 ntTSL 4 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 AL391361.2-202ENST00000454826 439 ntTSL 5 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 RN7SKP241-201ENST00000464584 291 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 AC079944.1-201ENST00000485426 495 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 EIF4E2P2-201ENST00000492033 736 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 HMGN1P13-201ENST00000505795 138 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 LINC01085-203ENST00000511195 326 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 AC093770.1-201ENST00000511559 571 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 Y_RNA.675-201ENST00000516389 149 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 SEC11B-201ENST00000518383 499 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 IGKV2D-18-201ENST00000519785 375 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 MRVI1-AS1-201ENST00000525578 829 ntTSL 3 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 AC121758.1-202ENST00000556917 658 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 MPPE1P1-201ENST00000557286 1076 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 MIR4637-201ENST00000582405 84 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC9.39□□□□□ -0.91
LRCH3Q96II8 AC093063.1-201ENST00000599317 363 ntBASIC9.39□□□□□ -0.91
LRCH3Q96II8 AC068276.1-201ENST00000605793 379 ntBASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms