Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 AL022324.2-201ENST00000434827 780 ntBASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 RPL23AP28-201ENST00000448062 470 ntBASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 RN7SL492P-201ENST00000460700 295 ntBASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 HMGB3P14-201ENST00000494195 599 ntBASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 AC104629.1-201ENST00000494226 508 ntBASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 AC140063.1-201ENST00000541343 259 ntBASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 MIR744-201ENST00000578242 98 ntBASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 SNORA70D-201ENST00000578836 135 ntBASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 CTSLP2-201ENST00000580501 394 ntBASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 GTF2IP6-201ENST00000583143 541 ntBASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 AL391001.1-201ENST00000602747 715 ntBASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 RPS4XP21-201ENST00000603814 750 ntBASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 AC005972.3-201ENST00000606304 481 ntBASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 MRPL57P3-201ENST00000619218 176 ntBASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 AC061999.1-201ENST00000624454 177 ntBASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
BHLHA9Q7RTU4 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 RN7SKP189-201ENST00000365042 330 ntBASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 RPLP1P10-201ENST00000413972 339 ntBASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 AC008753.1-201ENST00000423096 284 ntBASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 RPS3AP49-201ENST00000472161 790 ntBASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 RN7SL790P-201ENST00000474043 298 ntBASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 RN7SL350P-201ENST00000492591 299 ntBASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 AC021220.1-201ENST00000507445 630 ntBASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 AC010442.1-201ENST00000515583 816 ntBASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 AC087575.1-201ENST00000585087 229 ntBASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 AL591222.2-201ENST00000604443 754 ntBASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 U91328.4-201ENST00000608919 517 ntBASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 ENO1P4-201ENST00000416471 1785 ntBASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 AC079248.1-201ENST00000427568 1546 ntBASIC7.17□□□□□ -1.26
BHLHA9Q7RTU4 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 DLEU2L-201ENST00000371086 3555 ntBASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 RACGAP1P-201ENST00000550663 1879 ntBASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 ARSFP1-201ENST00000398758 477 ntBASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 AL353133.1-201ENST00000407695 401 ntBASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 SPATA20P1-201ENST00000423089 438 ntBASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 EIF2S2P3-201ENST00000428356 999 ntBASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 AL590128.1-201ENST00000433407 286 ntBASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
BHLHA9Q7RTU4 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms