Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC044860.3-201ENST00000559957 368 ntBASIC4.86□□□□□ -1.63
RPL39P62891 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC4.86□□□□□ -1.63
RPL39P62891 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC4.86□□□□□ -1.63
RPL39P62891 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC4.86□□□□□ -1.63
RPL39P62891 AC136944.5-201ENST00000573021 151 ntBASIC4.86□□□□□ -1.63
RPL39P62891 AC096708.2-201ENST00000577676 512 ntBASIC4.86□□□□□ -1.63
RPL39P62891 PRELID3BP3-201ENST00000584963 545 ntBASIC4.86□□□□□ -1.63
RPL39P62891 EIF1-207ENST00000591776 797 ntTSL 4 BASIC4.86□□□□□ -1.63
RPL39P62891 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC4.86□□□□□ -1.63
RPL39P62891 AC011497.2-201ENST00000600255 639 ntBASIC4.86□□□□□ -1.63
RPL39P62891 AC026468.1-201ENST00000614981 107 ntBASIC4.86□□□□□ -1.63
RPL39P62891 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC4.86□□□□□ -1.63
RPL39P62891 OR1N1-202ENST00000619659 939 ntBASIC4.86□□□□□ -1.63
RPL39P62891 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 AP001885.1-201ENST00000621658 558 ntBASIC4.86□□□□□ -1.63
RPL39P62891 AC106795.5-201ENST00000623288 454 ntBASIC4.86□□□□□ -1.63
RPL39P62891 AC110769.3-201ENST00000624567 1173 ntBASIC4.86□□□□□ -1.63
RPL39P62891 SNX18P10-201ENST00000625014 519 ntBASIC4.86□□□□□ -1.63
RPL39P62891 AC068205.4-201ENST00000637880 804 ntBASIC4.86□□□□□ -1.63
RPL39P62891 AC087269.2-201ENST00000641764 975 ntBASIC4.86□□□□□ -1.63
RPL39P62891 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC4.86□□□□□ -1.63
RPL39P62891 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 AC125232.1-201ENST00000452554 1408 ntBASIC4.86□□□□□ -1.63
RPL39P62891 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC4.86□□□□□ -1.63
RPL39P62891 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RPL39P62891 ERG-202ENST00000398897 4651 ntTSL 5 BASIC4.86□□□□□ -1.63
RPL39P62891 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 AP002370.1-201ENST00000528055 1602 ntBASIC4.86□□□□□ -1.63
RPL39P62891 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC4.86□□□□□ -1.63
RPL39P62891 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RPL39P62891 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RPL39P62891 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC4.85□□□□□ -1.63
RPL39P62891 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 OR2AT4-201ENST00000305159 1042 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RPL39P62891 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RPL39P62891 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC4.85□□□□□ -1.63
RPL39P62891 RNA5SP65-201ENST00000363166 119 ntBASIC4.85□□□□□ -1.63
RPL39P62891 CST13P-201ENST00000376992 428 ntBASIC4.85□□□□□ -1.63
RPL39P62891 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RPL39P62891 B4GALT6-203ENST00000383131 1239 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RPL39P62891 OR7E117P-201ENST00000422682 1112 ntBASIC4.85□□□□□ -1.63
RPL39P62891 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC4.85□□□□□ -1.63
RPL39P62891 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC4.85□□□□□ -1.63
RPL39P62891 SNX19-202ENST00000426933 888 ntTSL 2 BASIC4.85□□□□□ -1.63
RPL39P62891 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC4.85□□□□□ -1.63
RPL39P62891 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC4.85□□□□□ -1.63
RPL39P62891 RPE-210ENST00000438204 796 ntTSL 2 BASIC4.85□□□□□ -1.63
RPL39P62891 RPE-213ENST00000445268 668 ntTSL 5 BASIC4.85□□□□□ -1.63
RPL39P62891 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 AC114755.1-201ENST00000453101 868 ntBASIC4.85□□□□□ -1.63
RPL39P62891 RN7SL563P-201ENST00000481233 298 ntBASIC4.85□□□□□ -1.63
RPL39P62891 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC4.85□□□□□ -1.63
RPL39P62891 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC4.85□□□□□ -1.63
RPL39P62891 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC4.85□□□□□ -1.63
RPL39P62891 AC090539.2-201ENST00000523425 671 ntBASIC4.85□□□□□ -1.63
RPL39P62891 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC4.85□□□□□ -1.63
RPL39P62891 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC4.85□□□□□ -1.63
RPL39P62891 CRYAB-215ENST00000533971 981 ntTSL 2 BASIC4.85□□□□□ -1.63
RPL39P62891 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC4.85□□□□□ -1.63
RPL39P62891 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 ACTG1P15-201ENST00000570019 1063 ntBASIC4.85□□□□□ -1.63
RPL39P62891 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC4.85□□□□□ -1.63
RPL39P62891 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC4.85□□□□□ -1.63
RPL39P62891 AL023806.2-201ENST00000603042 263 ntBASIC4.85□□□□□ -1.63
RPL39P62891 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC4.85□□□□□ -1.63
RPL39P62891 AL359704.2-201ENST00000604335 521 ntBASIC4.85□□□□□ -1.63
RPL39P62891 AL136141.1-201ENST00000605780 369 ntBASIC4.85□□□□□ -1.63
RPL39P62891 OR6L2P-201ENST00000608207 925 ntBASIC4.85□□□□□ -1.63
RPL39P62891 MIR6872-201ENST00000612981 62 ntBASIC4.85□□□□□ -1.63
RPL39P62891 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC4.85□□□□□ -1.63
RPL39P62891 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC4.85□□□□□ -1.63
RPL39P62891 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC4.85□□□□□ -1.63
RPL39P62891 API5P1-201ENST00000424316 1510 ntBASIC4.85□□□□□ -1.63
RPL39P62891 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms