Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
RHBDL3P58872 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RHBDL3P58872 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RHBDL3P58872 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RHBDL3P58872 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.37□□□□□ -1.07
RHBDL3P58872 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RHBDL3P58872 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
RHBDL3P58872 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
RHBDL3P58872 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.37□□□□□ -1.07
RHBDL3P58872 AL023806.3-201ENST00000638502 2704 ntBASIC8.37□□□□□ -1.07
RHBDL3P58872 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
RHBDL3P58872 RN7SKP184-201ENST00000362348 333 ntBASIC8.37□□□□□ -1.07
RHBDL3P58872 SUMO2P13-201ENST00000403109 272 ntBASIC8.37□□□□□ -1.07
RHBDL3P58872 MIR1266-201ENST00000408125 84 ntBASIC8.37□□□□□ -1.07
RHBDL3P58872 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC8.37□□□□□ -1.07
RHBDL3P58872 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC8.37□□□□□ -1.07
RHBDL3P58872 RPL12P49-201ENST00000441100 121 ntBASIC8.37□□□□□ -1.07
RHBDL3P58872 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC8.37□□□□□ -1.07
RHBDL3P58872 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC8.37□□□□□ -1.07
RHBDL3P58872 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC8.37□□□□□ -1.07
RHBDL3P58872 NPM1P9-201ENST00000453156 844 ntBASIC8.37□□□□□ -1.07
RHBDL3P58872 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC8.37□□□□□ -1.07
RHBDL3P58872 RPS3AP49-201ENST00000472161 790 ntBASIC8.37□□□□□ -1.07
RHBDL3P58872 RPL5P33-201ENST00000487833 905 ntBASIC8.37□□□□□ -1.07
RHBDL3P58872 RN7SL143P-201ENST00000496780 297 ntBASIC8.37□□□□□ -1.07
RHBDL3P58872 AC114324.2-202ENST00000503812 134 ntBASIC8.37□□□□□ -1.07
RHBDL3P58872 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC8.37□□□□□ -1.07
RHBDL3P58872 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC8.37□□□□□ -1.07
RHBDL3P58872 PPIAP6-201ENST00000557078 499 ntBASIC8.37□□□□□ -1.07
RHBDL3P58872 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC8.37□□□□□ -1.07
RHBDL3P58872 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC8.37□□□□□ -1.07
RHBDL3P58872 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC8.37□□□□□ -1.07
RHBDL3P58872 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC8.37□□□□□ -1.07
RHBDL3P58872 MIR6889-201ENST00000613185 59 ntBASIC8.37□□□□□ -1.07
RHBDL3P58872 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC8.37□□□□□ -1.07
RHBDL3P58872 AC015819.1-201ENST00000613588 663 ntBASIC8.37□□□□□ -1.07
RHBDL3P58872 AP005212.4-201ENST00000614206 710 ntBASIC8.37□□□□□ -1.07
RHBDL3P58872 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC8.37□□□□□ -1.07
RHBDL3P58872 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC8.37□□□□□ -1.07
RHBDL3P58872 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC8.37□□□□□ -1.07
RHBDL3P58872 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC8.37□□□□□ -1.07
RHBDL3P58872 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RHBDL3P58872 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
RHBDL3P58872 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RHBDL3P58872 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC8.37□□□□□ -1.07
RHBDL3P58872 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC8.37□□□□□ -1.07
RHBDL3P58872 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC8.37□□□□□ -1.07
RHBDL3P58872 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RHBDL3P58872 MED6-212ENST00000615788 1700 ntTSL 5 BASIC8.37□□□□□ -1.07
RHBDL3P58872 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
RHBDL3P58872 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC8.37□□□□□ -1.07
RHBDL3P58872 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
RHBDL3P58872 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC8.37□□□□□ -1.07
RHBDL3P58872 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC8.37□□□□□ -1.07
RHBDL3P58872 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
RHBDL3P58872 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC8.36□□□□□ -1.07
RHBDL3P58872 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC8.36□□□□□ -1.07
RHBDL3P58872 OR5AQ1P-203ENST00000641818 1529 ntBASIC8.36□□□□□ -1.07
RHBDL3P58872 GMFG-201ENST00000253054 616 ntTSL 5 BASIC8.36□□□□□ -1.07
RHBDL3P58872 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC8.36□□□□□ -1.07
RHBDL3P58872 RN7SKP130-201ENST00000364924 301 ntBASIC8.36□□□□□ -1.07
RHBDL3P58872 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC8.36□□□□□ -1.07
RHBDL3P58872 RPLP1P10-201ENST00000413972 339 ntBASIC8.36□□□□□ -1.07
RHBDL3P58872 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC8.36□□□□□ -1.07
RHBDL3P58872 RPL17P17-201ENST00000419491 557 ntBASIC8.36□□□□□ -1.07
RHBDL3P58872 Z82198.3-201ENST00000421145 199 ntBASIC8.36□□□□□ -1.07
RHBDL3P58872 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC8.36□□□□□ -1.07
RHBDL3P58872 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC8.36□□□□□ -1.07
RHBDL3P58872 MYL6P3-201ENST00000436904 432 ntBASIC8.36□□□□□ -1.07
RHBDL3P58872 AC010878.1-201ENST00000456500 1047 ntBASIC8.36□□□□□ -1.07
RHBDL3P58872 RN7SL492P-201ENST00000460700 295 ntBASIC8.36□□□□□ -1.07
RHBDL3P58872 RPL34P34-201ENST00000465389 354 ntBASIC8.36□□□□□ -1.07
RHBDL3P58872 TRIM36-IT1-201ENST00000503723 881 ntBASIC8.36□□□□□ -1.07
RHBDL3P58872 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC8.36□□□□□ -1.07
RHBDL3P58872 MTCYBP44-201ENST00000514835 823 ntBASIC8.36□□□□□ -1.07
RHBDL3P58872 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC8.36□□□□□ -1.07
RHBDL3P58872 ASB8-207ENST00000536953 923 ntTSL 2 BASIC8.36□□□□□ -1.07
RHBDL3P58872 BTG1P1-201ENST00000540396 508 ntBASIC8.36□□□□□ -1.07
RHBDL3P58872 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC8.36□□□□□ -1.07
RHBDL3P58872 ACTG1P15-201ENST00000570019 1063 ntBASIC8.36□□□□□ -1.07
RHBDL3P58872 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.36□□□□□ -1.07
RHBDL3P58872 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC8.36□□□□□ -1.07
RHBDL3P58872 AL713998.2-201ENST00000604538 1198 ntBASIC8.36□□□□□ -1.07
RHBDL3P58872 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC8.36□□□□□ -1.07
RHBDL3P58872 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RHBDL3P58872 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.36□□□□□ -1.07
RHBDL3P58872 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms