Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL6A2P12110 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL6A2P12110 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL6A2P12110 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL6A2P12110 AC092646.2-201ENST00000431242 2095 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.39□□□□□ -1.23
COL6A2P12110 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL6A2P12110 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC7.39□□□□□ -1.23
COL6A2P12110 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC7.39□□□□□ -1.23
COL6A2P12110 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL6A2P12110 EEF1A1P4-201ENST00000359165 1405 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.39□□□□□ -1.23
COL6A2P12110 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
COL6A2P12110 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL6A2P12110 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC7.39□□□□□ -1.23
COL6A2P12110 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.39□□□□□ -1.23
COL6A2P12110 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL6A2P12110 GZMB-203ENST00000382542 666 ntTSL 2 BASIC7.39□□□□□ -1.23
COL6A2P12110 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
COL6A2P12110 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
COL6A2P12110 AL109918.1-202ENST00000406724 436 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC7.39□□□□□ -1.23
COL6A2P12110 RBMY2YP-201ENST00000423333 912 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC7.39□□□□□ -1.23
COL6A2P12110 RPL7P7-201ENST00000428803 703 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 PYHIN5P-201ENST00000431627 723 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 AC245047.1-201ENST00000433276 873 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC7.39□□□□□ -1.23
COL6A2P12110 AC005040.1-201ENST00000437783 482 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC7.39□□□□□ -1.23
COL6A2P12110 MOB1AP2-201ENST00000446060 614 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 PRELID1P3-201ENST00000450055 643 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 DBIL5P-202ENST00000453414 250 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 RPS14P7-201ENST00000473701 448 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 RN7SL635P-201ENST00000492123 296 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 AL158068.1-201ENST00000506116 616 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 PRELID3BP5-201ENST00000508612 460 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC7.39□□□□□ -1.23
COL6A2P12110 SCARNA20.3-201ENST00000516913 131 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC7.39□□□□□ -1.23
COL6A2P12110 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.39□□□□□ -1.23
COL6A2P12110 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL6A2P12110 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.39□□□□□ -1.23
COL6A2P12110 RBM22P13-201ENST00000569805 1244 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 AC005412.1-201ENST00000580812 1049 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC7.39□□□□□ -1.23
COL6A2P12110 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC7.39□□□□□ -1.23
COL6A2P12110 AL021918.1-201ENST00000603933 236 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 AC103974.2-201ENST00000611319 778 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 AC004477.3-201ENST00000614061 590 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 EIF5P2-201ENST00000618904 1035 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 AP003476.1-201ENST00000623984 516 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL6A2P12110 AC233280.20-201ENST00000637412 416 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 MTND2P41-201ENST00000637599 773 ntBASIC7.39□□□□□ -1.23
COL6A2P12110 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL6A2P12110 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
COL6A2P12110 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
COL6A2P12110 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL6A2P12110 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.39□□□□□ -1.23
COL6A2P12110 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.39□□□□□ -1.23
COL6A2P12110 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL6A2P12110 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL6A2P12110 AC073342.2-201ENST00000595842 1800 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC7.38□□□□□ -1.23
COL6A2P12110 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.38□□□□□ -1.23
COL6A2P12110 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
COL6A2P12110 AL627309.5-203ENST00000466557 1301 ntTSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 COQ3-202ENST00000369240 646 ntTSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.38□□□□□ -1.23
COL6A2P12110 ANAPC10P1-201ENST00000395991 556 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC7.38□□□□□ -1.23
COL6A2P12110 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC7.38□□□□□ -1.23
COL6A2P12110 FAF2P1-201ENST00000429974 1298 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC7.38□□□□□ -1.23
COL6A2P12110 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 RPS10P3-201ENST00000439253 494 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC7.38□□□□□ -1.23
COL6A2P12110 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC7.38□□□□□ -1.23
COL6A2P12110 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 AC008026.1-201ENST00000460492 447 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 RN7SL685P-201ENST00000476271 298 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 RN7SL335P-201ENST00000482790 304 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 RPL34P29-201ENST00000491411 325 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms