Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 RNA5SP172-201ENST00000365061 118 ntBASIC7.28□□□□□ -1.24
PCDH9Q9HC56 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 PRKAR1AP1-201ENST00000441422 1162 ntBASIC7.28□□□□□ -1.24
PCDH9Q9HC56 AC114755.1-201ENST00000453101 868 ntBASIC7.28□□□□□ -1.24
PCDH9Q9HC56 SNORA81.1-201ENST00000458922 177 ntBASIC7.28□□□□□ -1.24
PCDH9Q9HC56 RN7SL392P-201ENST00000473024 299 ntBASIC7.28□□□□□ -1.24
PCDH9Q9HC56 AC079594.1-201ENST00000489757 331 ntBASIC7.28□□□□□ -1.24
PCDH9Q9HC56 RN7SL775P-201ENST00000498361 336 ntBASIC7.28□□□□□ -1.24
PCDH9Q9HC56 OR5M4P-201ENST00000529436 925 ntBASIC7.28□□□□□ -1.24
PCDH9Q9HC56 OR9L1P-201ENST00000529493 933 ntBASIC7.28□□□□□ -1.24
PCDH9Q9HC56 AL132640.2-202ENST00000559732 614 ntBASIC7.28□□□□□ -1.24
PCDH9Q9HC56 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 RN7SL697P-201ENST00000582484 299 ntBASIC7.28□□□□□ -1.24
PCDH9Q9HC56 EXOSC3P2-201ENST00000594464 497 ntBASIC7.28□□□□□ -1.24
PCDH9Q9HC56 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.28□□□□□ -1.24
PCDH9Q9HC56 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 AL391262.1-201ENST00000556558 1992 ntBASIC7.28□□□□□ -1.24
PCDH9Q9HC56 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
PCDH9Q9HC56 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.24
PCDH9Q9HC56 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.24
PCDH9Q9HC56 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.27□□□□□ -1.24
PCDH9Q9HC56 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
PCDH9Q9HC56 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.27□□□□□ -1.24
PCDH9Q9HC56 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 MFSD8-256ENST00000641949 1640 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 ZNF710-AS1-202ENST00000620791 2133 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 MTND6P1-201ENST00000417434 424 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 CYP4F34P-201ENST00000425951 481 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 CT45A11P-201ENST00000448043 1134 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 CYCSP44-201ENST00000448560 313 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 SNORA35.1-201ENST00000458908 128 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 CEACAMP3-202ENST00000483806 638 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 AC111000.1-201ENST00000514545 713 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 OR4A21P-201ENST00000532759 944 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 MIR4470-201ENST00000583453 72 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 AL035417.2-201ENST00000603887 796 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 AC012640.3-201ENST00000607847 430 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 AC012511.1-201ENST00000608140 449 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 AL450226.2-201ENST00000622913 439 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 AL132796.3-201ENST00000624703 900 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 DLST-216ENST00000626051 252 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 FKBP1AP4-201ENST00000631775 336 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 AL139254.2-202ENST00000641937 1156 ntBASIC7.27□□□□□ -1.25
PCDH9Q9HC56 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.27□□□□□ -1.25
PCDH9Q9HC56 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms