Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 RACGAP1P-201ENST00000550663 1879 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 RN7SKP257-201ENST00000364525 309 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 RNA5SP355-201ENST00000365317 135 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 RNU2-5P-201ENST00000410533 180 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 PPIAP30-201ENST00000415473 519 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 FABP5P1-201ENST00000423401 411 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 FABP5P2-201ENST00000439042 408 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 RPL34P34-201ENST00000465389 354 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 AC134698.1-201ENST00000511619 643 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 AP001803.1-201ENST00000525668 147 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 AL135978.1-201ENST00000553618 1266 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 AC061975.3-201ENST00000583209 244 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 AC015818.6-201ENST00000584274 634 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 AL136139.1-201ENST00000605568 222 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 RN7SL126P-201ENST00000616400 299 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 AL132796.3-201ENST00000624703 900 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 AC090774.4-201ENST00000578888 1372 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 BRD7P6-201ENST00000431406 1860 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 AP000866.6-201ENST00000638898 3579 ntBASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
RSPO3Q9BXY4 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 RPS3AP5-201ENST00000389400 821 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 DUTP4-201ENST00000424782 475 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 AC134879.1-201ENST00000426062 394 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 RPL14P5-201ENST00000436474 730 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 CR391992.1-201ENST00000438601 394 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 WBP1LP1-201ENST00000460451 896 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 RN7SL379P-201ENST00000479912 293 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 OR9L1P-201ENST00000529493 933 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 OR5M6P-201ENST00000530227 937 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 AP000662.1-201ENST00000530952 487 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 AP006587.5-201ENST00000532033 739 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 AL049869.4-201ENST00000555669 178 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 MIR744-201ENST00000578242 98 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 AC122710.3-201ENST00000606566 541 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 AC087894.3-201ENST00000623682 349 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 AC120057.5-201ENST00000623840 154 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 AL356585.10-201ENST00000641883 123 ntBASIC6.4□□□□□ -1.38
RSPO3Q9BXY4 NEK2P4-201ENST00000425793 1329 ntBASIC6.4□□□□□ -1.39
RSPO3Q9BXY4 AL512310.3-201ENST00000547023 1335 ntBASIC6.4□□□□□ -1.39
RSPO3Q9BXY4 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.4□□□□□ -1.39
RSPO3Q9BXY4 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RSPO3Q9BXY4 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RSPO3Q9BXY4 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RSPO3Q9BXY4 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RSPO3Q9BXY4 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RSPO3Q9BXY4 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms