Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 EEF1GP7-201ENST00000422983 703 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 AC021876.1-201ENST00000425959 359 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 C2orf74-202ENST00000426997 879 ntAPPRIS P2 TSL 3 BASIC5.37□□□□□ -1.55
CXCL1P09341 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL1P09341 RPL3P8-201ENST00000432928 1191 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC5.37□□□□□ -1.55
CXCL1P09341 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC5.37□□□□□ -1.55
CXCL1P09341 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC5.37□□□□□ -1.55
CXCL1P09341 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC5.37□□□□□ -1.55
CXCL1P09341 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CXCL1P09341 MRPS21P1-201ENST00000453850 223 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 PSPC1P2-201ENST00000455130 225 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 AC139451.1-201ENST00000463176 330 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 AC015820.1-201ENST00000473882 321 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 AC084878.1-201ENST00000480555 648 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.37□□□□□ -1.55
CXCL1P09341 RN7SL272P-201ENST00000487762 289 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 RN7SL792P-201ENST00000496286 305 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC5.37□□□□□ -1.55
CXCL1P09341 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC5.37□□□□□ -1.55
CXCL1P09341 AC093281.1-201ENST00000514239 549 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.37□□□□□ -1.55
CXCL1P09341 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL1P09341 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC5.37□□□□□ -1.55
CXCL1P09341 CD63-206ENST00000548160 648 ntTSL 2 BASIC5.37□□□□□ -1.55
CXCL1P09341 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC5.37□□□□□ -1.55
CXCL1P09341 AC026111.1-201ENST00000551090 1195 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.37□□□□□ -1.55
CXCL1P09341 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.37□□□□□ -1.55
CXCL1P09341 CDH13-207ENST00000565636 810 ntTSL 5 BASIC5.37□□□□□ -1.55
CXCL1P09341 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC5.37□□□□□ -1.55
CXCL1P09341 RN7SL49P-201ENST00000581392 298 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL1P09341 AC087645.1-201ENST00000588528 291 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 DTNA-220ENST00000590831 847 ntTSL 2 BASIC5.37□□□□□ -1.55
CXCL1P09341 BICRA-AS1-201ENST00000598376 547 ntTSL 4 BASIC5.37□□□□□ -1.55
CXCL1P09341 AC097717.1-251ENST00000608419 183 ntTSL 5 BASIC5.37□□□□□ -1.55
CXCL1P09341 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC5.37□□□□□ -1.55
CXCL1P09341 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC5.37□□□□□ -1.55
CXCL1P09341 OR1N1-202ENST00000619659 939 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 AC120057.5-201ENST00000623840 154 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 AC068631.1-215ENST00000630331 490 ntTSL 5 BASIC5.37□□□□□ -1.55
CXCL1P09341 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC5.37□□□□□ -1.55
CXCL1P09341 SMG7-216ENST00000638826 219 ntTSL 2 BASIC5.37□□□□□ -1.55
CXCL1P09341 AP001153.1-201ENST00000641024 338 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CXCL1P09341 AL592429.1-201ENST00000403909 1473 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.37□□□□□ -1.55
CXCL1P09341 AC011369.2-201ENST00000624423 1567 ntBASIC5.37□□□□□ -1.55
CXCL1P09341 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CXCL1P09341 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL1P09341 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL1P09341 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CXCL1P09341 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.36□□□□□ -1.55
CXCL1P09341 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CXCL1P09341 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CXCL1P09341 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CXCL1P09341 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC5.36□□□□□ -1.55
CXCL1P09341 AC005332.9-201ENST00000620266 2921 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 SPIN2B-201ENST00000275988 1152 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CXCL1P09341 AL109918.1-202ENST00000406724 436 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 SNORA3.1-201ENST00000408166 111 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 RPSAP2-201ENST00000416785 888 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 CRIP1P3-201ENST00000416794 220 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC5.36□□□□□ -1.55
CXCL1P09341 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.36□□□□□ -1.55
CXCL1P09341 RPL4P2-201ENST00000447259 1282 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 PRDX1P1-201ENST00000449329 596 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 AC012493.1-201ENST00000453252 760 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 AZI2-207ENST00000457172 1136 ntTSL 5 BASIC5.36□□□□□ -1.55
CXCL1P09341 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC5.36□□□□□ -1.55
CXCL1P09341 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC5.36□□□□□ -1.55
CXCL1P09341 RN7SL395P-201ENST00000462960 291 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CXCL1P09341 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.36□□□□□ -1.55
CXCL1P09341 AC087280.1-201ENST00000530632 1003 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC5.36□□□□□ -1.55
CXCL1P09341 AC093063.1-201ENST00000599317 363 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 AC023513.1-201ENST00000604396 691 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 CUX2P1-201ENST00000606426 298 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 AC012488.1-201ENST00000611221 640 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 AL137246.2-201ENST00000613439 662 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CXCL1P09341 AC073862.2-201ENST00000625114 701 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 TTC38-207ENST00000629918 162 ntTSL 5 BASIC5.36□□□□□ -1.55
CXCL1P09341 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.36□□□□□ -1.55
CXCL1P09341 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CXCL1P09341 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CXCL1P09341 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC5.36□□□□□ -1.55
CXCL1P09341 NCOA4P2-201ENST00000340589 1813 ntBASIC5.36□□□□□ -1.55
CXCL1P09341 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms