Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 RNA5SP218-201ENST00000363188 109 ntBASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 RNU4-81P-201ENST00000363561 144 ntBASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 FAUP2-201ENST00000394301 401 ntBASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 CNN3P1-201ENST00000401596 935 ntBASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AL627308.2-201ENST00000420014 432 ntBASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AC009237.4-201ENST00000441078 238 ntBASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 NFU1-207ENST00000462320 558 ntTSL 4 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AC068587.2-201ENST00000478386 781 ntBASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AF305872.1-201ENST00000485217 471 ntBASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 OR4N3P-201ENST00000559395 818 ntBASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AC011193.2-201ENST00000582638 367 ntBASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 CR382285.1-202ENST00000604687 547 ntBASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AC098590.2-201ENST00000614787 281 ntBASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AC027506.1-201ENST00000621395 198 ntBASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AC135068.4-201ENST00000622949 925 ntBASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 OR7E161P-202ENST00000641994 1033 ntBASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 AC012213.2-201ENST00000562917 4597 ntBASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CDK5RAP1Q96SZ6 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 SEPT7P7-201ENST00000420492 1301 ntBASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 RPL24P7-201ENST00000399435 453 ntBASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 IGKV1OR2-3-201ENST00000411475 288 ntBASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 CDK7P1-201ENST00000434574 693 ntBASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 RPS7P4-201ENST00000444127 582 ntBASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 OFD1P3Y-201ENST00000453312 783 ntBASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 BX323845.2-201ENST00000458382 234 ntBASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 MYL6P4-201ENST00000477911 453 ntBASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 RPS10P28-201ENST00000480396 498 ntBASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 RN7SL306P-201ENST00000492941 296 ntBASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 AP004607.5-201ENST00000532034 217 ntBASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 AC004232.2-201ENST00000574245 821 ntBASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 RN7SL667P-201ENST00000582817 298 ntBASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 AL121782.1-201ENST00000611242 413 ntBASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 AL121985.2-201ENST00000621192 555 ntBASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 AC068057.2-201ENST00000624047 895 ntBASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms