Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 AC006511.2-201ENST00000388966 660 ntBASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 AL590762.1-201ENST00000391782 432 ntBASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 RAN-201ENST00000392367 780 ntTSL 5 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 HNRNPCP2-201ENST00000399515 881 ntBASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 RNU4-64P-201ENST00000410795 131 ntBASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 AC009299.1-201ENST00000429684 717 ntBASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 AC090954.1-201ENST00000445502 361 ntBASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 RN7SL516P-201ENST00000496127 297 ntBASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 MIR3689C-201ENST00000581239 72 ntBASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 SNRPCP20-201ENST00000588011 210 ntBASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 AC119674.1-209ENST00000642031 997 ntBASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 AL358913.2-201ENST00000553881 1548 ntBASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 MAPK10-344ENST00000641718 3746 ntBASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC50Q8IVM0 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 SNX18P3-202ENST00000565670 1750 ntBASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 PCNAP3-201ENST00000397222 778 ntBASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 AL390840.1-201ENST00000420303 988 ntBASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 PRDX1P1-201ENST00000449329 596 ntBASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 RN7SL834P-201ENST00000461450 286 ntBASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 RN7SL791P-201ENST00000467868 295 ntBASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 RN7SL160P-201ENST00000468558 284 ntBASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 RPS10P20-201ENST00000494130 463 ntBASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 RPL5P11-201ENST00000498068 893 ntBASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 OR7E163P-201ENST00000505943 894 ntBASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 MIR4301-201ENST00000577203 66 ntBASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 AP001120.4-201ENST00000590231 108 ntBASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 AC104184.1-201ENST00000607513 721 ntBASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 AC012629.3-201ENST00000623397 328 ntBASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.49□□□□□ -1.21
CCDC50Q8IVM0 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 AL121949.2-201ENST00000403446 1548 ntBASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 SNORA51.7-201ENST00000384171 134 ntBASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 AC017035.1-201ENST00000411999 1115 ntBASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 GNAI2P2-201ENST00000417003 916 ntBASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 FDPSP8-201ENST00000438304 1089 ntBASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7.48□□□□□ -1.21
CCDC50Q8IVM0 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms