Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSX4O60224 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSX4O60224 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.53□□□□□ -1.36
SSX4O60224 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.53□□□□□ -1.36
SSX4O60224 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SSX4O60224 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSX4O60224 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSX4O60224 HDAC1P1-201ENST00000455482 1445 ntBASIC6.53□□□□□ -1.36
SSX4O60224 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC6.53□□□□□ -1.36
SSX4O60224 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.53□□□□□ -1.36
SSX4O60224 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSX4O60224 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SSX4O60224 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSX4O60224 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.53□□□□□ -1.36
SSX4O60224 RNA5SP79-201ENST00000365193 109 ntBASIC6.53□□□□□ -1.36
SSX4O60224 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSX4O60224 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC6.53□□□□□ -1.36
SSX4O60224 VDAC1P8-201ENST00000406025 853 ntBASIC6.53□□□□□ -1.36
SSX4O60224 YWHAZP3-201ENST00000415292 738 ntBASIC6.53□□□□□ -1.36
SSX4O60224 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC6.53□□□□□ -1.36
SSX4O60224 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.53□□□□□ -1.36
SSX4O60224 EEF1A1P34-201ENST00000419888 1267 ntBASIC6.53□□□□□ -1.36
SSX4O60224 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC6.53□□□□□ -1.36
SSX4O60224 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.53□□□□□ -1.36
SSX4O60224 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.53□□□□□ -1.36
SSX4O60224 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC6.53□□□□□ -1.36
SSX4O60224 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSX4O60224 AL390026.1-201ENST00000456647 457 ntBASIC6.53□□□□□ -1.36
SSX4O60224 TAAR3P-201ENST00000466706 1078 ntBASIC6.53□□□□□ -1.36
SSX4O60224 RN7SL36P-201ENST00000469345 276 ntBASIC6.53□□□□□ -1.36
SSX4O60224 AC087385.2-201ENST00000477729 498 ntBASIC6.53□□□□□ -1.36
SSX4O60224 TAAR3P-202ENST00000481759 1025 ntBASIC6.53□□□□□ -1.36
SSX4O60224 RN7SL635P-201ENST00000492123 296 ntBASIC6.53□□□□□ -1.36
SSX4O60224 AC106760.2-201ENST00000504159 619 ntBASIC6.53□□□□□ -1.36
SSX4O60224 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSX4O60224 SCARNA20.1-201ENST00000516009 138 ntBASIC6.53□□□□□ -1.36
SSX4O60224 IGKV1D-32-201ENST00000517449 318 ntBASIC6.53□□□□□ -1.36
SSX4O60224 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC6.53□□□□□ -1.36
SSX4O60224 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.53□□□□□ -1.36
SSX4O60224 SLC25A51P2-201ENST00000535708 889 ntBASIC6.53□□□□□ -1.36
SSX4O60224 AL356800.1-201ENST00000553339 735 ntBASIC6.53□□□□□ -1.36
SSX4O60224 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSX4O60224 COX6CP11-201ENST00000555293 229 ntBASIC6.53□□□□□ -1.36
SSX4O60224 AL132640.2-202ENST00000559732 614 ntBASIC6.53□□□□□ -1.36
SSX4O60224 DNM1P31-201ENST00000564149 696 ntBASIC6.53□□□□□ -1.36
SSX4O60224 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC6.53□□□□□ -1.36
SSX4O60224 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC6.53□□□□□ -1.36
SSX4O60224 AC011193.2-201ENST00000582638 367 ntBASIC6.53□□□□□ -1.36
SSX4O60224 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC6.53□□□□□ -1.36
SSX4O60224 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC6.53□□□□□ -1.36
SSX4O60224 Z93930.3-201ENST00000607919 749 ntBASIC6.53□□□□□ -1.36
SSX4O60224 AC135050.6-202ENST00000613584 392 ntBASIC6.53□□□□□ -1.36
SSX4O60224 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC6.53□□□□□ -1.36
SSX4O60224 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSX4O60224 MAPK10-270ENST00000641102 3538 ntBASIC6.53□□□□□ -1.36
SSX4O60224 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSX4O60224 AC110597.1-201ENST00000562669 3176 ntBASIC6.53□□□□□ -1.36
SSX4O60224 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
SSX4O60224 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
SSX4O60224 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
SSX4O60224 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 LINC02128-205ENST00000641755 1334 ntBASIC6.52□□□□□ -1.37
SSX4O60224 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
SSX4O60224 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 AC104581.5-201ENST00000624171 7141 ntBASIC6.52□□□□□ -1.37
SSX4O60224 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 SNORA68-201ENST00000384437 133 ntBASIC6.52□□□□□ -1.37
SSX4O60224 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 RNA5SP23-201ENST00000391006 105 ntBASIC6.52□□□□□ -1.37
SSX4O60224 TERF1P4-201ENST00000399580 1115 ntBASIC6.52□□□□□ -1.37
SSX4O60224 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.52□□□□□ -1.37
SSX4O60224 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SSX4O60224 RPSAP1-201ENST00000421328 880 ntBASIC6.52□□□□□ -1.37
SSX4O60224 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.52□□□□□ -1.37
SSX4O60224 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SSX4O60224 RHEBP1-201ENST00000448647 556 ntBASIC6.52□□□□□ -1.37
SSX4O60224 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC6.52□□□□□ -1.37
SSX4O60224 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.52□□□□□ -1.37
SSX4O60224 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.52□□□□□ -1.37
SSX4O60224 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.52□□□□□ -1.37
SSX4O60224 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.52□□□□□ -1.37
SSX4O60224 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 PABPC1P1-201ENST00000506347 591 ntBASIC6.52□□□□□ -1.37
SSX4O60224 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC6.52□□□□□ -1.37
SSX4O60224 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.52□□□□□ -1.37
SSX4O60224 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSX4O60224 AC092368.2-201ENST00000565911 600 ntBASIC6.52□□□□□ -1.37
SSX4O60224 MRPS21P9-201ENST00000571150 257 ntBASIC6.52□□□□□ -1.37
SSX4O60224 AP005901.4-201ENST00000577336 569 ntBASIC6.52□□□□□ -1.37
SSX4O60224 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms