Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX3Q99909 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.17□□□□□ -1.42
SSX3Q99909 OLMALINC-203ENST00000641087 3779 ntBASIC6.17□□□□□ -1.42
SSX3Q99909 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SSX3Q99909 SNORA51.7-201ENST00000384171 134 ntBASIC6.17□□□□□ -1.42
SSX3Q99909 MAML3-201ENST00000398940 831 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX3Q99909 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX3Q99909 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX3Q99909 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC6.17□□□□□ -1.42
SSX3Q99909 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSX3Q99909 CEACAMP5-201ENST00000448037 961 ntBASIC6.17□□□□□ -1.42
SSX3Q99909 AC114755.1-201ENST00000453101 868 ntBASIC6.17□□□□□ -1.42
SSX3Q99909 PTMAP1-205ENST00000455552 325 ntBASIC6.17□□□□□ -1.42
SSX3Q99909 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX3Q99909 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.17□□□□□ -1.42
SSX3Q99909 RN7SL308P-201ENST00000464971 297 ntBASIC6.17□□□□□ -1.42
SSX3Q99909 RN7SL228P-201ENST00000470060 303 ntBASIC6.17□□□□□ -1.42
SSX3Q99909 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC6.17□□□□□ -1.42
SSX3Q99909 RN7SL58P-201ENST00000473445 294 ntBASIC6.17□□□□□ -1.42
SSX3Q99909 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSX3Q99909 RN7SL869P-201ENST00000497032 300 ntBASIC6.17□□□□□ -1.42
SSX3Q99909 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.17□□□□□ -1.42
SSX3Q99909 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX3Q99909 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.17□□□□□ -1.42
SSX3Q99909 LINC00520-206ENST00000560336 883 ntTSL 3 BASIC6.17□□□□□ -1.42
SSX3Q99909 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX3Q99909 DNM1P31-201ENST00000564149 696 ntBASIC6.17□□□□□ -1.42
SSX3Q99909 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX3Q99909 AC243312.1-201ENST00000570582 275 ntBASIC6.17□□□□□ -1.42
SSX3Q99909 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX3Q99909 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.17□□□□□ -1.42
SSX3Q99909 AL157762.1-201ENST00000619612 415 ntBASIC6.17□□□□□ -1.42
SSX3Q99909 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX3Q99909 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX3Q99909 SAMMSON-210ENST00000641260 1308 ntBASIC6.17□□□□□ -1.42
SSX3Q99909 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSX3Q99909 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX3Q99909 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.17□□□□□ -1.42
SSX3Q99909 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
SSX3Q99909 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX3Q99909 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSX3Q99909 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSX3Q99909 EEF1A1P4-201ENST00000359165 1405 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC6.16□□□□□ -1.42
SSX3Q99909 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSX3Q99909 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSX3Q99909 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSX3Q99909 SAMMSON-222ENST00000641901 2727 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.16□□□□□ -1.42
SSX3Q99909 NCOA4P2-201ENST00000340589 1813 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.16□□□□□ -1.42
SSX3Q99909 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSX3Q99909 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.16□□□□□ -1.42
SSX3Q99909 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.16□□□□□ -1.42
SSX3Q99909 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSX3Q99909 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.16□□□□□ -1.42
SSX3Q99909 AC100810.3-201ENST00000633189 2240 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSX3Q99909 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSX3Q99909 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SSX3Q99909 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC6.16□□□□□ -1.42
SSX3Q99909 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSX3Q99909 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC6.16□□□□□ -1.42
SSX3Q99909 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC6.16□□□□□ -1.42
SSX3Q99909 EEF1A1P34-201ENST00000419888 1267 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC6.16□□□□□ -1.42
SSX3Q99909 AC093107.1-201ENST00000422772 609 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.16□□□□□ -1.42
SSX3Q99909 AC019185.3-201ENST00000438805 323 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 MRPS21P1-201ENST00000453850 223 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 AL445187.1-201ENST00000502685 260 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 GAPDHP61-201ENST00000507324 1005 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 AC006070.1-201ENST00000508151 193 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 RN7SKP105-201ENST00000517192 314 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.16□□□□□ -1.42
SSX3Q99909 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.16□□□□□ -1.42
SSX3Q99909 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSX3Q99909 AP004833.3-201ENST00000531893 322 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSX3Q99909 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSX3Q99909 NDFIP1P1-201ENST00000543144 525 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSX3Q99909 RPL41P2-201ENST00000544920 409 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 SERPINA9-208ENST00000546329 1156 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSX3Q99909 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.16□□□□□ -1.42
SSX3Q99909 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.16□□□□□ -1.42
SSX3Q99909 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.16□□□□□ -1.42
SSX3Q99909 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC6.16□□□□□ -1.42
SSX3Q99909 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC6.16□□□□□ -1.42
SSX3Q99909 MIR4685-201ENST00000578185 69 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 AL606760.4-201ENST00000617613 718 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 BX005195.1-201ENST00000618097 1198 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 AC087893.2-201ENST00000623272 255 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 AC099667.1-201ENST00000624222 469 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
SSX3Q99909 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
SSX3Q99909 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SSX3Q99909 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.16□□□□□ -1.42
SSX3Q99909 ATP5A1P10-201ENST00000622403 1603 ntBASIC6.16□□□□□ -1.42
SSX3Q99909 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms