Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNA5SP172-201ENST00000365061 118 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 PDCL3P5-201ENST00000398028 722 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 RN7SKP232-201ENST00000410170 290 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 GAPDHP69-201ENST00000425504 1008 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 AC114402.2-201ENST00000432760 643 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 OR13C1P-201ENST00000457612 963 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 AP000805.1-201ENST00000471604 784 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 AL135933.1-201ENST00000498657 802 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 SSU72P6-201ENST00000532644 488 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 EIF4A3P1-201ENST00000578499 647 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 CCDC58P1-201ENST00000578567 430 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 MIR378H-201ENST00000579966 83 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 MIR5682-201ENST00000584864 76 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 MIR8082-201ENST00000612488 81 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 AL132796.3-201ENST00000624703 900 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 AL049541.2-201ENST00000626377 555 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 AC006453.3-201ENST00000635891 377 ntBASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
C9orf40Q8IXQ3 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
C9orf40Q8IXQ3 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
C9orf40Q8IXQ3 KYNUP2-201ENST00000582280 1329 ntBASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 RNA5SP355-201ENST00000365317 135 ntBASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 RNA5SP280-201ENST00000411230 115 ntBASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 MEAF6P1-201ENST00000416092 327 ntBASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 OR7E7P-201ENST00000455678 1012 ntBASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 RPS16P9-201ENST00000477220 427 ntBASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 RN7SL705P-201ENST00000481678 294 ntBASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 RN7SL426P-201ENST00000579106 295 ntBASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 AC010463.3-201ENST00000594077 500 ntBASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 AC139792.1-201ENST00000607051 647 ntBASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
C9orf40Q8IXQ3 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 CDY19P-201ENST00000411668 1613 ntBASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 CDY18P-201ENST00000438294 1609 ntBASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 AC104581.5-201ENST00000624171 7141 ntBASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 RNU1-56P-201ENST00000391303 164 ntBASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 AL590762.1-201ENST00000391782 432 ntBASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms