Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC4.91□□□□□ -1.62
RPL39P62891 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
RPL39P62891 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC4.9□□□□□ -1.62
RPL39P62891 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
RPL39P62891 LRRC37A12P-201ENST00000454917 1801 ntBASIC4.9□□□□□ -1.62
RPL39P62891 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.62
RPL39P62891 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC4.9□□□□□ -1.62
RPL39P62891 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
RPL39P62891 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RPL39P62891 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RPL39P62891 AL359694.2-201ENST00000567753 1615 ntBASIC4.9□□□□□ -1.62
RPL39P62891 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RPL39P62891 EEF1A1P15-201ENST00000395772 1408 ntBASIC4.9□□□□□ -1.62
RPL39P62891 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC4.9□□□□□ -1.62
RPL39P62891 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RPL39P62891 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
RPL39P62891 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC4.9□□□□□ -1.62
RPL39P62891 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
RPL39P62891 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RPL39P62891 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RPL39P62891 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
RPL39P62891 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RPL39P62891 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RPL39P62891 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
RPL39P62891 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RPL39P62891 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
RPL39P62891 SNORA73B-201ENST00000363217 204 ntBASIC4.9□□□□□ -1.63
RPL39P62891 STSP1-201ENST00000412493 1151 ntBASIC4.9□□□□□ -1.63
RPL39P62891 BMP2KL-201ENST00000414251 1225 ntBASIC4.9□□□□□ -1.63
RPL39P62891 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RPL39P62891 AC092568.1-201ENST00000440950 1284 ntBASIC4.9□□□□□ -1.63
RPL39P62891 AC087499.3-202ENST00000441215 1173 ntBASIC4.9□□□□□ -1.63
RPL39P62891 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC4.9□□□□□ -1.63
RPL39P62891 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RPL39P62891 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC4.9□□□□□ -1.63
RPL39P62891 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC4.9□□□□□ -1.63
RPL39P62891 RN7SL571P-201ENST00000468302 295 ntBASIC4.9□□□□□ -1.63
RPL39P62891 ACTG1P20-201ENST00000486001 468 ntBASIC4.9□□□□□ -1.63
RPL39P62891 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC4.9□□□□□ -1.63
RPL39P62891 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC4.9□□□□□ -1.63
RPL39P62891 IGLV1-62-201ENST00000518003 441 ntBASIC4.9□□□□□ -1.63
RPL39P62891 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC4.9□□□□□ -1.63
RPL39P62891 AC022239.4-201ENST00000602626 504 ntBASIC4.9□□□□□ -1.63
RPL39P62891 AC023310.4-201ENST00000613130 650 ntBASIC4.9□□□□□ -1.63
RPL39P62891 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC4.9□□□□□ -1.63
RPL39P62891 ELMO2P1-202ENST00000614283 794 ntBASIC4.9□□□□□ -1.63
RPL39P62891 CASC22-202ENST00000628396 802 ntTSL 5 BASIC4.9□□□□□ -1.63
RPL39P62891 FAAHP1-207ENST00000635606 398 ntTSL 3 BASIC4.9□□□□□ -1.63
RPL39P62891 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RPL39P62891 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC4.9□□□□□ -1.63
RPL39P62891 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
RPL39P62891 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RPL39P62891 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC4.9□□□□□ -1.63
RPL39P62891 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC4.9□□□□□ -1.63
RPL39P62891 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
RPL39P62891 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RPL39P62891 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RPL39P62891 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RPL39P62891 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC4.9□□□□□ -1.63
RPL39P62891 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RPL39P62891 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RPL39P62891 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RPL39P62891 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RPL39P62891 EEF1A1P2-201ENST00000553854 1447 ntBASIC4.89□□□□□ -1.63
RPL39P62891 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC4.89□□□□□ -1.63
RPL39P62891 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC4.89□□□□□ -1.63
RPL39P62891 AC034229.2-201ENST00000566945 2508 ntBASIC4.89□□□□□ -1.63
RPL39P62891 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC4.89□□□□□ -1.63
RPL39P62891 AC009120.2-204ENST00000621548 2032 ntBASIC4.89□□□□□ -1.63
RPL39P62891 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
RPL39P62891 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC4.89□□□□□ -1.63
RPL39P62891 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC4.89□□□□□ -1.63
RPL39P62891 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
RPL39P62891 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
RPL39P62891 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPL39P62891 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPL39P62891 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPL39P62891 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RPL39P62891 RN7SKP211-201ENST00000363328 315 ntBASIC4.89□□□□□ -1.63
RPL39P62891 RNA5SP472-201ENST00000363868 119 ntBASIC4.89□□□□□ -1.63
RPL39P62891 SNORA70.8-201ENST00000384231 136 ntBASIC4.89□□□□□ -1.63
RPL39P62891 RNA5SP18-201ENST00000390935 121 ntBASIC4.89□□□□□ -1.63
RPL39P62891 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPL39P62891 IGLC6-201ENST00000410078 317 ntBASIC4.89□□□□□ -1.63
RPL39P62891 RPSAP60-201ENST00000415403 880 ntBASIC4.89□□□□□ -1.63
RPL39P62891 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC4.89□□□□□ -1.63
RPL39P62891 FTOP1-201ENST00000419363 861 ntBASIC4.89□□□□□ -1.63
RPL39P62891 RPL6P2-201ENST00000425480 783 ntBASIC4.89□□□□□ -1.63
RPL39P62891 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC4.89□□□□□ -1.63
RPL39P62891 OR51P1P-201ENST00000447547 942 ntBASIC4.89□□□□□ -1.63
RPL39P62891 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC4.89□□□□□ -1.63
RPL39P62891 RPSAP7-201ENST00000456871 885 ntBASIC4.89□□□□□ -1.63
RPL39P62891 PSMA6P2-201ENST00000457574 686 ntBASIC4.89□□□□□ -1.63
RPL39P62891 RPL23AP8-201ENST00000479812 475 ntBASIC4.89□□□□□ -1.63
RPL39P62891 OR7E163P-201ENST00000505943 894 ntBASIC4.89□□□□□ -1.63
RPL39P62891 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC4.89□□□□□ -1.63
RPL39P62891 ADAM20P2-201ENST00000515830 1273 ntBASIC4.89□□□□□ -1.63
RPL39P62891 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC4.89□□□□□ -1.63
RPL39P62891 OR7E2P-201ENST00000533071 889 ntBASIC4.89□□□□□ -1.63
RPL39P62891 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms