Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC8.88□□□□□ -0.99
ERCC3P19447 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ERCC3P19447 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ERCC3P19447 EEF1A1P30-201ENST00000429708 1315 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 PSMC1P6-201ENST00000477233 1319 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 PSMC1P7-201ENST00000495689 1315 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
ERCC3P19447 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ERCC3P19447 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ERCC3P19447 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
ERCC3P19447 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
ERCC3P19447 TAS2R2P-201ENST00000421146 910 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 USP12PY-201ENST00000427677 1064 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 SNX18P14-201ENST00000429308 574 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC8.88□□□□□ -0.99
ERCC3P19447 AC239800.1-201ENST00000442049 719 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 AL161454.1-201ENST00000446226 569 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ERCC3P19447 AC013429.1-201ENST00000456604 422 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 AC104849.1-201ENST00000462623 405 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC8.88□□□□□ -0.99
ERCC3P19447 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC8.88□□□□□ -0.99
ERCC3P19447 STRADBP1-201ENST00000478954 1281 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 CIR1P1-201ENST00000524055 1133 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
ERCC3P19447 ZKSCAN7P1-201ENST00000543668 673 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC8.88□□□□□ -0.99
ERCC3P19447 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC8.88□□□□□ -0.99
ERCC3P19447 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC8.88□□□□□ -0.99
ERCC3P19447 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC8.88□□□□□ -0.99
ERCC3P19447 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC8.88□□□□□ -0.99
ERCC3P19447 AC015849.2-201ENST00000605738 409 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 AC026741.1-201ENST00000605892 482 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC8.88□□□□□ -0.99
ERCC3P19447 FRG2MP-201ENST00000613317 856 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 AL137246.2-201ENST00000613439 662 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 MIR8084-201ENST00000614105 89 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
ERCC3P19447 AC027506.1-201ENST00000621395 198 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 AC068880.4-201ENST00000623082 495 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
ERCC3P19447 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC8.88□□□□□ -0.99
ERCC3P19447 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC8.88□□□□□ -0.99
ERCC3P19447 FGL2-202ENST00000637771 989 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 AC099654.15-201ENST00000639802 509 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC8.88□□□□□ -0.99
ERCC3P19447 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
ERCC3P19447 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
ERCC3P19447 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
ERCC3P19447 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
ERCC3P19447 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
ERCC3P19447 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ERCC3P19447 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
ERCC3P19447 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
ERCC3P19447 GUCY2GP-201ENST00000479705 3222 ntBASIC8.88□□□□□ -0.99
ERCC3P19447 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.88□□□□□ -0.99
ERCC3P19447 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
ERCC3P19447 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC8.88□□□□□ -0.99
ERCC3P19447 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
ERCC3P19447 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
ERCC3P19447 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
ERCC3P19447 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC8.87□□□□□ -0.99
ERCC3P19447 AC127502.2-201ENST00000602663 2351 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ERCC3P19447 MTHFD1P1-201ENST00000413059 2764 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
ERCC3P19447 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
ERCC3P19447 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.87□□□□□ -0.99
ERCC3P19447 AC017002.4-201ENST00000604721 1525 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ERCC3P19447 RN7SKP208-201ENST00000365474 361 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC8.87□□□□□ -0.99
ERCC3P19447 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ERCC3P19447 MEAF6P1-201ENST00000416092 327 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC8.87□□□□□ -0.99
ERCC3P19447 AL512661.1-201ENST00000434586 1253 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC8.87□□□□□ -0.99
ERCC3P19447 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC8.87□□□□□ -0.99
ERCC3P19447 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC8.87□□□□□ -0.99
ERCC3P19447 Z99127.2-201ENST00000441426 334 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC8.87□□□□□ -0.99
ERCC3P19447 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC8.87□□□□□ -0.99
ERCC3P19447 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC8.87□□□□□ -0.99
ERCC3P19447 OR7E62P-201ENST00000456741 477 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 RN7SL706P-201ENST00000460079 292 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 AC008620.1-201ENST00000468453 592 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ERCC3P19447 PRELID3BP6-201ENST00000503839 571 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 AC112518.2-201ENST00000508565 425 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ERCC3P19447 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC8.87□□□□□ -0.99
ERCC3P19447 OR56A7P-201ENST00000524865 941 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC8.87□□□□□ -0.99
ERCC3P19447 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ERCC3P19447 AC079598.4-201ENST00000549647 265 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC8.87□□□□□ -0.99
ERCC3P19447 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC8.87□□□□□ -0.99
ERCC3P19447 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC8.87□□□□□ -0.99
ERCC3P19447 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC8.87□□□□□ -0.99
ERCC3P19447 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms