Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 RNU1-38P-201ENST00000362817 144 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC093107.1-201ENST00000422772 609 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AL354794.2-201ENST00000424795 1248 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC073900.1-201ENST00000429766 776 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 NQO1-204ENST00000439109 924 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 PMS2P11-201ENST00000451831 574 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 BZW1P1-201ENST00000454901 1240 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC018892.2-201ENST00000457656 693 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 RN7SL91P-201ENST00000469313 291 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC068522.1-201ENST00000482895 345 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC027801.3-201ENST00000515049 698 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 ULK4P3-201ENST00000563895 440 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 RN7SL311P-201ENST00000579858 306 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC015801.1-201ENST00000585651 153 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AL683813.2-201ENST00000605245 502 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AL592504.1-201ENST00000605319 439 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AL121809.2-201ENST00000613169 341 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC098590.2-201ENST00000614787 281 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC087072.2-201ENST00000621060 682 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 ABCA11P-202ENST00000504019 2110 ntBASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DRB4X5D2U9 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AL162171.3-201ENST00000617439 3178 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 MAPK10-344ENST00000641718 3746 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 RNA5SP218-201ENST00000363188 109 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 RBBP4P4-201ENST00000398588 1289 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 RPS21P1-201ENST00000434479 247 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 NUCKS1P1-201ENST00000452067 703 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 RN7SL325P-201ENST00000460434 283 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 IGLV1-62-201ENST00000518003 441 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AC090539.2-201ENST00000523425 671 ntBASIC5.41□□□□□ -1.54
HLA-DRB4X5D2U9 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms