Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC023141.10-201ENST00000415634 200 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 RPL5P28-201ENST00000418634 693 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VMP1Q96GC9 AC093107.1-201ENST00000422772 609 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 GAPDHP73-201ENST00000423411 1007 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 SNX18P9-201ENST00000440580 835 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 PCMTD1P3-201ENST00000451824 472 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 CREM-224ENST00000468236 582 ntTSL 3 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 CREM-234ENST00000484283 660 ntTSL 5 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VMP1Q96GC9 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 AC097263.1-201ENST00000496795 606 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 AP004833.1-201ENST00000507987 1238 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 AC097460.2-201ENST00000511857 741 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 SNX18P27-201ENST00000523611 779 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 OR5BK1P-201ENST00000550421 823 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
VMP1Q96GC9 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 AC073488.8-201ENST00000631952 757 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 SPATA31C2-201ENST00000324915 3777 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VMP1Q96GC9 AC132219.2-201ENST00000624416 2327 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 MAPK10-365ENST00000641902 3825 ntBASIC7.05□□□□□ -1.28
VMP1Q96GC9 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
VMP1Q96GC9 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
VMP1Q96GC9 Z93929.1-201ENST00000418200 1475 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VMP1Q96GC9 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VMP1Q96GC9 GOT2P1-201ENST00000440922 1309 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VMP1Q96GC9 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VMP1Q96GC9 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VMP1Q96GC9 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC090643.1-201ENST00000623600 3100 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VMP1Q96GC9 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VMP1Q96GC9 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VMP1Q96GC9 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
VMP1Q96GC9 SNORA51.7-201ENST00000384171 134 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 FABP5P1-201ENST00000423401 411 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 VN1R35P-201ENST00000428102 693 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 SNX18P14-201ENST00000429308 574 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 ST13P2-201ENST00000438916 1109 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 FABP5P2-201ENST00000439042 408 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC004692.1-201ENST00000455430 424 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 RNU7-157P-201ENST00000459600 66 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC117383.2-201ENST00000514722 322 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 OR7E96P-201ENST00000530816 976 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC013283.1-201ENST00000557282 492 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC244034.2-201ENST00000562504 509 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC243312.1-201ENST00000570582 275 ntBASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC7.04□□□□□ -1.28
VMP1Q96GC9 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms