Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC8.45□□□□□ -1.06
RHBDL3P58872 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC8.45□□□□□ -1.06
RHBDL3P58872 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC8.45□□□□□ -1.06
RHBDL3P58872 UBE2V2P1-201ENST00000434717 398 ntBASIC8.45□□□□□ -1.06
RHBDL3P58872 AL583856.1-201ENST00000454078 1101 ntBASIC8.45□□□□□ -1.06
RHBDL3P58872 VN1R6P-201ENST00000458417 907 ntBASIC8.45□□□□□ -1.06
RHBDL3P58872 RN7SL259P-201ENST00000478499 253 ntBASIC8.45□□□□□ -1.06
RHBDL3P58872 AC074386.1-206ENST00000487102 761 ntBASIC8.45□□□□□ -1.06
RHBDL3P58872 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
RHBDL3P58872 AC120036.3-201ENST00000517826 292 ntBASIC8.45□□□□□ -1.06
RHBDL3P58872 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC8.45□□□□□ -1.06
RHBDL3P58872 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC8.45□□□□□ -1.06
RHBDL3P58872 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC8.45□□□□□ -1.06
RHBDL3P58872 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
RHBDL3P58872 SAA3P-201ENST00000533267 365 ntBASIC8.45□□□□□ -1.06
RHBDL3P58872 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC8.45□□□□□ -1.06
RHBDL3P58872 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC8.45□□□□□ -1.06
RHBDL3P58872 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC8.45□□□□□ -1.06
RHBDL3P58872 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
RHBDL3P58872 AC009955.2-201ENST00000597288 542 ntBASIC8.45□□□□□ -1.06
RHBDL3P58872 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC8.45□□□□□ -1.06
RHBDL3P58872 MIR6885-201ENST00000612241 66 ntBASIC8.45□□□□□ -1.06
RHBDL3P58872 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RHBDL3P58872 AC025287.2-201ENST00000621911 668 ntBASIC8.45□□□□□ -1.06
RHBDL3P58872 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC8.45□□□□□ -1.06
RHBDL3P58872 AC140479.4-205ENST00000636339 820 ntBASIC8.45□□□□□ -1.06
RHBDL3P58872 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.45□□□□□ -1.06
RHBDL3P58872 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.45□□□□□ -1.06
RHBDL3P58872 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC8.45□□□□□ -1.06
RHBDL3P58872 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC8.45□□□□□ -1.06
RHBDL3P58872 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC8.45□□□□□ -1.06
RHBDL3P58872 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.45□□□□□ -1.06
RHBDL3P58872 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
RHBDL3P58872 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
RHBDL3P58872 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RHBDL3P58872 RBMY1A3P-201ENST00000382670 1404 ntBASIC8.45□□□□□ -1.06
RHBDL3P58872 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RHBDL3P58872 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
RHBDL3P58872 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
RHBDL3P58872 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
RHBDL3P58872 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
RHBDL3P58872 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC8.44□□□□□ -1.06
RHBDL3P58872 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC8.44□□□□□ -1.06
RHBDL3P58872 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RHBDL3P58872 AC095038.1-201ENST00000429248 1591 ntBASIC8.44□□□□□ -1.06
RHBDL3P58872 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RHBDL3P58872 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
RHBDL3P58872 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
RHBDL3P58872 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
RHBDL3P58872 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RHBDL3P58872 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
RHBDL3P58872 AL359263.1-201ENST00000441188 2796 ntBASIC8.44□□□□□ -1.06
RHBDL3P58872 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RHBDL3P58872 AC131392.2-201ENST00000505635 4332 ntBASIC8.44□□□□□ -1.06
RHBDL3P58872 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RHBDL3P58872 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC8.44□□□□□ -1.06
RHBDL3P58872 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
RHBDL3P58872 LDHAP5-201ENST00000394996 622 ntBASIC8.44□□□□□ -1.06
RHBDL3P58872 AL034417.1-201ENST00000399343 800 ntBASIC8.44□□□□□ -1.06
RHBDL3P58872 VN1R66P-201ENST00000412929 916 ntBASIC8.44□□□□□ -1.06
RHBDL3P58872 AC006509.1-201ENST00000420788 634 ntBASIC8.44□□□□□ -1.06
RHBDL3P58872 UQCRHP1-204ENST00000424609 274 ntBASIC8.44□□□□□ -1.06
RHBDL3P58872 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC8.44□□□□□ -1.06
RHBDL3P58872 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC8.44□□□□□ -1.06
RHBDL3P58872 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
RHBDL3P58872 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC8.44□□□□□ -1.06
RHBDL3P58872 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC8.44□□□□□ -1.06
RHBDL3P58872 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RHBDL3P58872 RPL7AP71-201ENST00000451120 739 ntBASIC8.44□□□□□ -1.06
RHBDL3P58872 RPL31P11-202ENST00000454082 372 ntBASIC8.44□□□□□ -1.06
RHBDL3P58872 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC8.44□□□□□ -1.06
RHBDL3P58872 RN7SL160P-201ENST00000468558 284 ntBASIC8.44□□□□□ -1.06
RHBDL3P58872 NACAP5-201ENST00000509863 636 ntBASIC8.44□□□□□ -1.06
RHBDL3P58872 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC8.44□□□□□ -1.06
RHBDL3P58872 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC8.44□□□□□ -1.06
RHBDL3P58872 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
RHBDL3P58872 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC8.44□□□□□ -1.06
RHBDL3P58872 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC8.44□□□□□ -1.06
RHBDL3P58872 AC096708.2-201ENST00000577676 512 ntBASIC8.44□□□□□ -1.06
RHBDL3P58872 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC8.44□□□□□ -1.06
RHBDL3P58872 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC8.44□□□□□ -1.06
RHBDL3P58872 AC135068.11-201ENST00000636378 921 ntBASIC8.44□□□□□ -1.06
RHBDL3P58872 AC011471.4-201ENST00000638271 216 ntBASIC8.44□□□□□ -1.06
RHBDL3P58872 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RHBDL3P58872 PHF2P2-202ENST00000444553 2865 ntBASIC8.44□□□□□ -1.06
RHBDL3P58872 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
RHBDL3P58872 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RHBDL3P58872 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RHBDL3P58872 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RHBDL3P58872 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.44□□□□□ -1.06
RHBDL3P58872 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
RHBDL3P58872 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC8.43□□□□□ -1.06
RHBDL3P58872 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RHBDL3P58872 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8.43□□□□□ -1.06
RHBDL3P58872 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC8.43□□□□□ -1.06
RHBDL3P58872 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
RHBDL3P58872 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RHBDL3P58872 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RHBDL3P58872 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
RHBDL3P58872 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms